Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0527
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 59  PCRPTNEALARRGRHG 106
           PCRP  +   RR  HG
Sbjct: 589 PCRPREQLTWRRNFHG 604


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 59  PCRPTNEALARRGRHG 106
           PCRP  +   RR  HG
Sbjct: 481 PCRPREQLTWRRNFHG 496


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 384 PRLINVSLPYFGDTFT 337
           P+ + V +P++G TFT
Sbjct: 259 PKKLIVGIPFYGRTFT 274


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 2    GTSLPRPSEPKPTSPARGAPCRP 70
            GT++P P+   P       PC P
Sbjct: 1083 GTTIPPPAVVMPEVDKPSQPCEP 1105



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 14   PRPSEPKPTSPARGAPCRPTNEALARRG 97
            P P E KP S      C  TN A  R+G
Sbjct: 1386 PLPEELKPQSGYFKIVCYFTNWAWYRKG 1413


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 318 IXSTPKALDSNPYYWKCFTSLNRNE 244
           I +TP  L   PY+WK  T   + E
Sbjct: 101 ILTTPFKL---PYFWKMLTGFGKIE 122


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 95  GRHGTTVAYIVDDSGSDHKFP 157
           G H   V  ++DD GS    P
Sbjct: 401 GYHQNEVGGVIDDGGSGQNQP 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,232
Number of Sequences: 336
Number of extensions: 1794
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)