Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0526
(394 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 100 4e-22
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 100 4e-22
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 100 4e-22
Z70781-4|CAA94834.1| 385|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 27 3.6
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 27 6.3
AF036706-14|AAK39276.2| 390|Caenorhabditis elegans Kinase, glh-... 26 8.4
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 100 bits (239), Expect = 4e-22
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 14 LKIVNEHLTTAQEYATNDNEKNMLLHYVKSFKEGDLSEHKEGSRFWIRDKGPIIETYQGF 193
+K +E L A A N N++ ML YV+ FK+GD++ HK+GSR+WI+D GP +E+Y GF
Sbjct: 284 MKRTHEWLDKAIPTAANKNQEEMLRKYVEHFKKGDIALHKDGSRYWIKDVGPAVESYIGF 343
Query: 194 IETYRDPSGQRXEFEGFVAMATR 262
IE YRDP+G R EFEGFVA +
Sbjct: 344 IENYRDPAGTRSEFEGFVAAVNK 366
Score = 63.3 bits (147), Expect = 6e-11
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +1
Query: 238 GFRGDGNKEMSKKFGSLVDGAERFIKLLPWGEDLXXDSXLRPDFTSLDVLTF 393
GF NKE SKKF +LV AE +K LPWG D D+ L+PDFT+LDV+ F
Sbjct: 359 GFVAAVNKETSKKFQTLVANAENILKRLPWGTDYEKDTFLKPDFTALDVIAF 410
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 100 bits (239), Expect = 4e-22
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 14 LKIVNEHLTTAQEYATNDNEKNMLLHYVKSFKEGDLSEHKEGSRFWIRDKGPIIETYQGF 193
+K +E L A A N N++ ML YV+ FK+GD++ HK+GSR+WI+D GP +E+Y GF
Sbjct: 246 MKRTHEWLDKAIPTAANKNQEEMLRKYVEHFKKGDIALHKDGSRYWIKDVGPAVESYIGF 305
Query: 194 IETYRDPSGQRXEFEGFVAMATR 262
IE YRDP+G R EFEGFVA +
Sbjct: 306 IENYRDPAGTRSEFEGFVAAVNK 328
Score = 63.3 bits (147), Expect = 6e-11
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +1
Query: 238 GFRGDGNKEMSKKFGSLVDGAERFIKLLPWGEDLXXDSXLRPDFTSLDVLTF 393
GF NKE SKKF +LV AE +K LPWG D D+ L+PDFT+LDV+ F
Sbjct: 321 GFVAAVNKETSKKFQTLVANAENILKRLPWGTDYEKDTFLKPDFTALDVIAF 372
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 100 bits (239), Expect = 4e-22
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 14 LKIVNEHLTTAQEYATNDNEKNMLLHYVKSFKEGDLSEHKEGSRFWIRDKGPIIETYQGF 193
+K +E L A A N N++ ML YV+ FK+GD++ HK+GSR+WI+D GP +E+Y GF
Sbjct: 284 MKRTHEWLDKAIPTAANKNQEEMLRKYVEHFKKGDIALHKDGSRYWIKDVGPAVESYIGF 343
Query: 194 IETYRDPSGQRXEFEGFVAMATR 262
IE YRDP+G R EFEGFVA +
Sbjct: 344 IENYRDPAGTRSEFEGFVAAVNK 366
Score = 63.3 bits (147), Expect = 6e-11
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +1
Query: 238 GFRGDGNKEMSKKFGSLVDGAERFIKLLPWGEDLXXDSXLRPDFTSLDVLTF 393
GF NKE SKKF +LV AE +K LPWG D D+ L+PDFT+LDV+ F
Sbjct: 359 GFVAAVNKETSKKFQTLVANAENILKRLPWGTDYEKDTFLKPDFTALDVIAF 410
>Z70781-4|CAA94834.1| 385|Caenorhabditis elegans Hypothetical
protein F57A8.6 protein.
Length = 385
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -1
Query: 259 CCHRHETLELTPLTTWITI--CLNETLICLNNRSLISYPKSASLFMLTKIAF 110
CC ++T +L P T + T C N+T+I + R PK+ +F+++++ F
Sbjct: 285 CCPSNKTEKLLPGTPYRTHQKCTNKTIIRDDQRFGYCDPKTGRVFIMSELNF 336
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 223 LTTWITICLNETLICLNNRSLISYPK 146
L WI+ C N T + NN SL++ P+
Sbjct: 409 LPDWISDCPNLTFLRANNNSLVALPE 434
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 266 CPRSSAVSSMALRGSLNCCPGVKTXKXIRSCD 361
CP + A S G NCCP +T CD
Sbjct: 544 CPNNIASSQRCSGGCTNCCPVGQTCMNGGCCD 575
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = +2
Query: 107 KEGDLSEHKEGSRFWIRDKG-----PIIETYQG-FIE 199
K G + E K+ S+FW RD P+I+T+ F+E
Sbjct: 88 KLGSMFEEKDVSKFWYRDSSLSEMLPMIDTFNNMFVE 124
>AF036706-14|AAK39276.2| 390|Caenorhabditis elegans Kinase,
glh-binding protein 1 protein.
Length = 390
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 269 DISLLPSPRNPRTHXADHLDHDM 201
D + LP NPR H H+ D+
Sbjct: 292 DTNFLPETENPRVHLTPHVARDL 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,941,754
Number of Sequences: 27780
Number of extensions: 145440
Number of successful extensions: 444
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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