Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0522
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0348 - 2607315-2607424,2608634-2609030 115 2e-26
06_01_0428 + 3055163-3055573 115 2e-26
06_01_0427 - 3054204-3054614 115 2e-26
06_01_0425 - 3045557-3046004,3046852-3046856 115 2e-26
06_01_0423 - 3039527-3039937 115 2e-26
05_04_0449 - 21355439-21355849 115 2e-26
04_03_0909 + 20748653-20749063 115 2e-26
01_06_1456 + 37507156-37507566 115 2e-26
06_01_0217 - 1644696-1645034,1645143-1645214 113 8e-26
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 113 8e-26
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 104 4e-23
12_02_0047 - 12836779-12837189 103 5e-23
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 103 9e-23
12_02_0048 - 12852335-12852745 98 3e-21
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 91 5e-19
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 62 2e-10
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 30 0.76
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 0.76
11_01_0128 - 1043053-1043151,1043238-1043570,1043588-1043707,104... 29 2.3
12_02_0213 - 15745459-15745908,15745981-15746559 27 5.3
04_01_0472 - 6144655-6145182,6145204-6145881,6149337-6149765,614... 27 5.3
06_03_1214 + 28469848-28473048 27 7.1
11_06_0639 - 25730092-25730224,25730867-25731045 27 9.3
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 27 9.3
04_01_0230 - 2921845-2922690 27 9.3
01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,410... 27 9.3
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>06_01_0428 + 3055163-3055573
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>06_01_0427 - 3054204-3054614
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 64 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 123
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 124 LCAIHA 129
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 160 RKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
RKQLATKA KSAP+TGGVKKPHR+RPGTVAL
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVAL 63
>06_01_0423 - 3039527-3039937
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>05_04_0449 - 21355439-21355849
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>04_03_0909 + 20748653-20749063
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>01_06_1456 + 37507156-37507566
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 4e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 113 bits (271), Expect = 8e-26
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 102 bits (245), Expect = 1e-22
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 49
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 113 bits (271), Expect = 8e-26
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 64 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 123
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 124 LCAIHA 129
Score = 87.8 bits (208), Expect = 4e-18
Identities = 48/63 (76%), Positives = 49/63 (77%), Gaps = 14/63 (22%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 246
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 247 VAL 255
VAL
Sbjct: 61 VAL 63
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 104 bits (249), Expect = 4e-23
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A + AEAYLVGLF DTN
Sbjct: 125 REIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVGLFEDTN 184
Query: 435 LCAIHA 452
LCAIH+
Sbjct: 185 LCAIHS 190
Score = 64.9 bits (151), Expect = 3e-11
Identities = 38/59 (64%), Positives = 40/59 (67%), Gaps = 10/59 (16%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTG----------GVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRK L AA APS+ GVKKP R+RPGTVAL
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVAL 124
>12_02_0047 - 12836779-12837189
Length = 136
Score = 103 bits (248), Expect = 5e-23
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +3
Query: 234 SPWYSGPREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLV 413
+PW REIR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQS+A + + AE YLV
Sbjct: 43 NPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQEAAETYLV 102
Query: 414 GLFXDTNLCAIHA 452
GLF DTNLC IHA
Sbjct: 103 GLFEDTNLCVIHA 115
Score = 70.9 bits (166), Expect = 4e-13
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VAL
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVAL 49
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 103 bits (246), Expect = 9e-23
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A + AEAYLVGLF DTN
Sbjct: 29 REIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQSHAVLALQEAAEAYLVGLFEDTN 88
Query: 435 LCAIHA 452
LCAIH+
Sbjct: 89 LCAIHS 94
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 181 AARKSAPSTGGVKKPHRYRPGTVAL 255
AARKSAP GGVKKPHRYRPGTVAL
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVAL 28
>12_02_0048 - 12852335-12852745
Length = 136
Score = 98.3 bits (234), Expect = 3e-21
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQS+A + AE YLVGLF DTN
Sbjct: 50 REIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVGLFKDTN 109
Query: 435 LCAIHA 452
LC IHA
Sbjct: 110 LCVIHA 115
Score = 75.8 bits (178), Expect = 2e-14
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVAL
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVAL 49
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 90.6 bits (215), Expect = 5e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 240
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRY P
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYPP 44
Score = 53.2 bits (122), Expect = 9e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 348 TDLRFQSAASELSRRQAEAYLVGLFXDTNLCAIHA 452
TDLRFQS A + AEAYLVGLF DTNLCAIHA
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 85
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAASELSRRQAEAYLVGLFXDT 431
REIR++QK+TELLI PF RLVREI + D+ R+ A + AE +LV +F +
Sbjct: 58 REIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVS 117
Query: 432 NLCAIHA 452
NLCAIHA
Sbjct: 118 NLCAIHA 124
Score = 35.9 bits (79), Expect = 0.015
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVAL 255
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVAL
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVAL 57
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 30.3 bits (65), Expect = 0.76
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 65 KISSLTCEKH*KSKQWLVLNKQPVNLLEVKLRVNNLLQKRRENQRRALV 211
K C++ + +Q ++ ++ + LL+ K + +N+++K +E QR+ V
Sbjct: 354 KQEEAACQEKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKV 402
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 0.76
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 112 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 240
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>11_01_0128 -
1043053-1043151,1043238-1043570,1043588-1043707,
1043810-1043993,1044088-1044275,1044714-1044808,
1044884-1045003,1045232-1045350,1052717-1052799,
1052892-1053071
Length = 506
Score = 28.7 bits (61), Expect = 2.3
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -2
Query: 260 FTRATVPGR*RCGFLTPPVLGADFRAAFVASCLRGALPPV-DLRAVCLVRAIVYFFNVFH 84
F +V C +L PP L ADF +A LR LPP DL++ +V IV + H
Sbjct: 317 FLPTSVSNLLNCDYLDPP-LKADFNEQCLAEHLREVLPPAKDLQSWKMV--IVPVIHHSH 373
Query: 83 KLSY*FSIILEFIDQFHNNDH 21
Y + ID F +N++
Sbjct: 374 WTLYCVNRNHGRIDVFDSNNY 394
>12_02_0213 - 15745459-15745908,15745981-15746559
Length = 342
Score = 27.5 bits (58), Expect = 5.3
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -2
Query: 365 LKTQISFEILSDFSHKTLERQLTDKQLSRLLITTNFTRATVPGR*RCGFLTPPVLGADFR 186
LK Q+ ++ H + QL + + + TT + +T GR R FLTPP A
Sbjct: 188 LKAQLQEQLRESQEHVS---QLEEPLRAAKISTTGASTSTAVGRDRYFFLTPPYPPAFHA 244
Query: 185 AAFVASCLRGALPP 144
AS L L P
Sbjct: 245 LLGEASMLATELAP 258
>04_01_0472 -
6144655-6145182,6145204-6145881,6149337-6149765,
6149930-6150123,6150222-6150261
Length = 622
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 317 TLERQLTDKQ---LSRLLITTNFTRATVPGR*RCGFLTPP 207
TLE QL + Q + + TT + +T GR R FLTPP
Sbjct: 436 TLEEQLRESQEHLQAAKISTTGASTSTAVGRDRYFFLTPP 475
>06_03_1214 + 28469848-28473048
Length = 1066
Score = 27.1 bits (57), Expect = 7.1
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = -2
Query: 377 RCGRLKTQISFEILSD--FSHKTLERQL--TDKQLSRLLITTNFTRATVP 240
R G LK+ +SF +SD F++ T Q+ + K L+ LLI TNF T+P
Sbjct: 401 RMGTLKS-LSFFSISDNHFTNITNALQILRSCKNLTSLLIGTNFKGETIP 449
>11_06_0639 - 25730092-25730224,25730867-25731045
Length = 103
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Frame = +3
Query: 207 WW-----SQEATSLSPWYSGPREIRRYQK 278
WW SQEAT W+ GPR R Q+
Sbjct: 62 WWGQGARSQEATMARRWWWGPRSSRSQQE 90
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 65 KISSLTCEKH*KSKQWLVLNKQPVNLLEVKLRVNNLLQKRRENQRRALVESRSHI 229
K+ + E H + KQ +V N P L NL+++RR+ QR E S I
Sbjct: 1303 KLIKVVYEHHPRPKQLIVENDLPQKL-------QNLIEERRDGQRGGQQEKNSFI 1350
>04_01_0230 - 2921845-2922690
Length = 281
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 305 QLTDKQLSRLLITTNFTRATVPGR*RCGFLTPPVLGADFRAAFVASCLRGALPP 144
QL ++ + + TT + +T GR R FLTPP A AS L L P
Sbjct: 102 QLEEQLRAAKISTTGASTSTAVGRDRYFFLTPPYPPAFHALLGEASMLATELAP 155
>01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,
4100974-4101107,4101337-4101435,4102619-4102994,
4103883-4104337,4104419-4107409
Length = 1460
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 328 KSLRISKLICVFSLPHRSSPGGKLRLISLAC 420
KSL +S + SLPH PG RL C
Sbjct: 1404 KSLHLSSCESIDSLPHLGLPGSLERLFIAGC 1434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,498,273
Number of Sequences: 37544
Number of extensions: 182353
Number of successful extensions: 577
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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