Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0522
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 115 2e-26
At5g10400.1 68418.m01206 histone H3 identical to several histone... 115 2e-26
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 115 2e-26
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 115 2e-26
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 115 2e-26
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 113 7e-26
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 113 7e-26
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 113 7e-26
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 113 7e-26
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 111 2e-25
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 110 5e-25
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 109 6e-25
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 98 3e-21
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 50 6e-07
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 28 2.6
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 27 5.9
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 115 bits (276), Expect = 2e-26
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 49
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 113 bits (271), Expect = 7e-26
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
R+IR+YQKSTE+LIRKLPFQRLVREIAQDFKTDLRFQS+A + AEAYLVGLF DTN
Sbjct: 50 RDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 93.9 bits (223), Expect = 5e-20
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVAL 49
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 113 bits (271), Expect = 7e-26
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 102 bits (245), Expect = 1e-22
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 49
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 113 bits (271), Expect = 7e-26
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 102 bits (245), Expect = 1e-22
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 49
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 113 bits (271), Expect = 7e-26
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 102 bits (245), Expect = 1e-22
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVAL
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVAL 49
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 111 bits (268), Expect = 2e-25
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELLIRKLPFQRLVREIAQD+KTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 94.7 bits (225), Expect = 3e-20
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQTARKS GGKAPR LATKAARKSAP+TGGVKKPHRYRPGTVAL
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVAL 49
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 110 bits (264), Expect = 5e-25
Identities = 55/66 (83%), Positives = 57/66 (86%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKSTELL RKLPFQRLVREIAQDFKTDLRFQS A + AEAYLVGLF DTN
Sbjct: 50 REIRKYQKSTELLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN 109
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 110 LCAIHA 115
Score = 94.3 bits (224), Expect = 3e-20
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MARTKQ+ARKS GGKAP KQLATKAARKSAP+TGGVKKPHR+RPGTVAL
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVAL 49
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 109 bits (263), Expect = 6e-25
Identities = 54/66 (81%), Positives = 57/66 (86%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQKST+LLIRKLPFQRLVREIAQDFK DLRFQS A + AEAYLVGLF DTN
Sbjct: 51 REIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTN 110
Query: 435 LCAIHA 452
LCAIHA
Sbjct: 111 LCAIHA 116
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/50 (80%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGVKKPHRYRPGTVAL 255
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVAL
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVAL 50
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 97.9 bits (233), Expect = 3e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAASELSRRQAEAYLVGLFXDTN 434
REIR+YQK+T+L+IRKLPFQRLV+EIAQ K DLRFQ+ A + AEA++VG+F DTN
Sbjct: 45 REIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTN 104
Query: 435 LCAIHA 452
LCA+HA
Sbjct: 105 LCAMHA 110
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 109 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVAL
Sbjct: 1 MARSNQTARKATGGKAP--HFAMRVWQHSTPP---LKKPYRYKPGTVAL 44
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 50.4 bits (115), Expect = 6e-07
Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 REIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL--RFQSAASELSRRQAEAYLVGLFXD 428
+EIR +QK T LLI F R VR I R+ + A + AE YLVGLF D
Sbjct: 88 KEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSD 147
Query: 429 TNLCAIHA 452
+ LCAIHA
Sbjct: 148 SMLCAIHA 155
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 118 TKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVAL 255
T+QT ++ R+ K +R++ P G KK +RYRPGTVAL
Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVAL 87
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 173 ASCLRGALPPVDLRAVCLVRAIVYFFNVFH 84
A C +G +P + L A+ V ++F VFH
Sbjct: 132 AQCKKGYVPLISLNALHQVHIFIFFLAVFH 161
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 65 KISSLTCEKH*KSKQWLVLNKQPVNLLEVKLRVNNLLQKRRENQR 199
K+ EKH K KQ +V N P L NL+++RR+ QR
Sbjct: 1306 KLIKAVYEKHPKPKQLIVENDLPQKL-------QNLIEERRDGQR 1343
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,464,341
Number of Sequences: 28952
Number of extensions: 146981
Number of successful extensions: 429
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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