Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0518
(488 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 56 5e-10
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 52 1e-08
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 42 9e-06
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 39 1e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 38 2e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 36 7e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 34 0.003
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 33 0.005
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 32 0.012
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 32 0.012
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 31 0.028
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 31 0.028
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.085
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 28 0.20
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.26
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 25 1.1
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 4.2
EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic anhy... 23 5.6
AF164151-1|AAD47075.1| 148|Anopheles gambiae translation initia... 23 7.4
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 22 9.8
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 22 9.8
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 56.4 bits (130), Expect = 5e-10
Identities = 23/64 (35%), Positives = 41/64 (64%)
Frame = +3
Query: 12 LIKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKMNITNYRPISVLSTLS 191
++K +AP+L +FN + +G FP ++K+ + PI+K GD+ + NYR I+ L ++
Sbjct: 568 VLKRCQTTVAPILAKLFNASLANGYFPKAWRKSWMVPIYKKGDRTDAINYRGITSLCAIA 627
Query: 192 KIFE 203
K+FE
Sbjct: 628 KVFE 631
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 51.6 bits (118), Expect = 1e-08
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 33 ILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKMNITNYRPISVLSTLSKIFE 203
+LAP L +FN + G+FP ++K + P+HK G + ++NYR I+ +K FE
Sbjct: 504 VLAPHLAKIFNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGITQTCATAKTFE 560
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 42.3 bits (95), Expect = 9e-06
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 ALIKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLST 185
A +KAA + V C ++ C+ G FP+ +K+ + + K G ++YRP+S+L
Sbjct: 453 AAVKAAIGMYPDVFCRMYQDCLTRGTFPSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDA 512
Query: 186 LSKIFE 203
L K+ E
Sbjct: 513 LGKVLE 518
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 38.7 bits (86), Expect = 1e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 ALIKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKMNIT-NYRPISVLST 185
A +KAA L V ++ C+ +G FP +K+ + I K G ++ +YRP+ +L
Sbjct: 439 AAVKAAILEHTGVFTALYQDCLVNGTFPAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDA 498
Query: 186 LSKIFE 203
L K+ E
Sbjct: 499 LGKVLE 504
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 37.9 bits (84), Expect = 2e-04
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 ALIKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLST 185
A +K A V C V+ C+++G FP +K+ + + K G ++YRP+ +L
Sbjct: 461 AAVKVAIEKYPGVFCRVYQDCLNTGTFPQQWKRQRLVLLPKPGKAPGESSSYRPLCMLDA 520
Query: 186 LSKIFE 203
L K+ E
Sbjct: 521 LGKVLE 526
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 35.9 bits (79), Expect = 7e-04
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 ALIKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKMNIT-NYRPISVLST 185
A +KAA L V ++ +C+++ FP +K+ + + K G +YRP+ +L
Sbjct: 506 AAVKAAILAYTDVFQALYQSCLETATFPAPWKRQRLVLLPKPGKPPGSNGSYRPLCMLDA 565
Query: 186 LSKIFE 203
L K+ E
Sbjct: 566 LGKVLE 571
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.9 bits (74), Expect = 0.003
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 AAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLSTLSKI 197
AA L V + +++G FP +K+ + + K+G ++YRPI +LS L KI
Sbjct: 443 AAILAFPEVFAKSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKI 502
Query: 198 FE 203
E
Sbjct: 503 LE 504
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 33.1 bits (72), Expect = 0.005
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 15 IKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLSTLS 191
IKAA VF C D+G FP +K+ + + K G + + RP++++ +
Sbjct: 421 IKAAIKAYLEAFLSVFQNCFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFA 480
Query: 192 KIFE 203
KI E
Sbjct: 481 KILE 484
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 31.9 bits (69), Expect = 0.012
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 57 VFNTCIDSGIFPTVFKKALVHPIHKNGDKMNI-TNYRPISVLSTLSKIFE 203
+F C+D+ FP +KK + I K G + +++RPI +L+ K++E
Sbjct: 461 LFQECLDNERFPDEWKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYE 510
Score = 31.5 bits (68), Expect = 0.016
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +2
Query: 254 SQNQYGFRSGRGTEDAALELTSTILEH------LNN--KAXTLAIFLDLSKAXDTVSVPI 409
++NQYGFR GR T A++L H NN K L + LD+ A +T S
Sbjct: 530 AENQYGFRRGRSTVQ-AIQLVVDAGSHAMSFGRTNNRDKRCLLVVALDVRNAFNTASWQC 588
Query: 410 LLSKLEVVGI 439
+ + LE G+
Sbjct: 589 IATALEDKGV 598
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.012
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 254 SQNQYGFRSGRGTEDAALELTS-TILEHLNNKAXT---LAIFLDLSKAXDTVSVPILLSK 421
S+NQYGFR GR T DA ++ S N+ + LD+ A ++ S +
Sbjct: 511 SENQYGFRKGRATTDAIEKVLSIASASRARNRGANRFCAVVTLDVKNAFNSASWTAIARS 570
Query: 422 LEVVGI 439
L+ + I
Sbjct: 571 LQRINI 576
Score = 30.7 bits (66), Expect = 0.028
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 21 AAGLILAPVLCH-VFNTCIDSGIFPTVFKK-ALVHPIHKNGDKMNIT-NYRPISVLSTLS 191
A +I P + V+ C+D+G+FP +KK LV I K G + + + RPI ++ ++
Sbjct: 430 ATAMIEEPTIFKKVYQRCLDTGVFPDNWKKQRLVLSIPKPGKRPGESGSSRPICLIDGVA 489
Query: 192 KIFE 203
K E
Sbjct: 490 KGLE 493
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 30.7 bits (66), Expect = 0.028
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 156 NYRPISVLSTLSKIFEXXXXXXXXXXXXXXXIIPKT 263
+YRPIS+LS L KIFE IIPK+
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKS 36
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 30.7 bits (66), Expect = 0.028
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 57 VFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLSTLSKIFE 203
V+ C+D FP +KK + + K G + +++RPI +L+ K FE
Sbjct: 459 VYQECLDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPICLLNNAGKTFE 508
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.085
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 57 VFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLSTLSKIFE 203
VF C+D FP +KK + + K G +++RPI +L K E
Sbjct: 464 VFQECLDMSCFPQPWKKQRLVLLPKPGKSPGEPSSFRPICLLDNTGKALE 513
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 27.9 bits (59), Expect = 0.20
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 15 IKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHKNGDKM-NITNYRPISVLSTLS 191
IKAA L V +V + +G FP+++K + I K G + + +RP+ ++ L+
Sbjct: 482 IKAAMLAYPDVFKNVLMNTLTTGQFPSMWKIQKLVLIPKPGKPPGHPSAFRPLGLVDNLA 541
Query: 192 KIFE 203
K+ E
Sbjct: 542 KVQE 545
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 0.26
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = +2
Query: 248 HNSQNQYGFRSGRGTEDAALEL-----TSTILEHLNNK--AXTLAIFLDLSKAXDTVS 400
H S NQYGFR G+ T L + T+ N + + + LD+ A +T S
Sbjct: 542 HLSPNQYGFRRGKSTVQGILRVVQAGRTAKSFNRTNGRDMRCLMVVSLDVRNAFNTAS 599
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 25.4 bits (53), Expect = 1.1
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 15 IKAAGLILAPVLCHVFNTCIDSGIFPTVFKKALVHPIHK-NGDKMNITNYRPISVLSTLS 191
+K L C V+ C+++ FP +K+ + I K N + RPI +L
Sbjct: 425 LKVGMLTATDAFCRVYQGCLENAKFPDEWKRQRLVLIPKPNKPPGEPGSVRPICLLDGAG 484
Query: 192 KIFE 203
K E
Sbjct: 485 KGLE 488
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 254 SQNQYGFRSGRGTEDA 301
S +Q+GFRS R T DA
Sbjct: 506 SDDQFGFRSRRSTVDA 521
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 4.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 319 HYIRTPKQQSXNARHFPR 372
HY+ +QQ ARH P+
Sbjct: 604 HYLPLQQQQQQQARHLPQ 621
>EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic
anhydrase protein.
Length = 255
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 57 VFNTCIDSGIFPTVFKKALV 116
VF TC+DS + PT F + V
Sbjct: 35 VFFTCMDSRMIPTRFTETHV 54
>AF164151-1|AAD47075.1| 148|Anopheles gambiae translation
initiation factor 4C (1A) protein.
Length = 148
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 103 LKTVGKIPESIQVLKT 56
LKT G+ PES+++ +T
Sbjct: 103 LKTYGEFPESVRINET 118
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 156 NYRPISVLSTLSKIFE 203
NYR I+ LS +K+FE
Sbjct: 1 NYRGITTLSAGAKVFE 16
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 22.2 bits (45), Expect = 9.8
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1
Query: 155 CNIHLITILVYGVH*CFFKNCWKDTGINTSVE---NMTKHRSENETSRL 18
C++ T L V C F + W++ G+ S+ N + SE ETS L
Sbjct: 375 CDVVAATFLDVAVLRCLFISHWQEEGVYWSLHYLYNRLRDISE-ETSAL 422
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,484
Number of Sequences: 2352
Number of extensions: 8585
Number of successful extensions: 30
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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