Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0513
(466 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5S9 Cluster: Calcitonin gene-related peptide-recepto... 81 2e-14
UniRef50_UPI0000DB6E76 Cluster: PREDICTED: similar to calcitonin... 46 5e-04
UniRef50_Q7PTA4 Cluster: ENSANGP00000016026; n=1; Anopheles gamb... 41 0.015
UniRef50_Q7KUX1 Cluster: CG4875-PB, isoform B; n=3; Sophophora|R... 38 0.081
UniRef50_O75575 Cluster: DNA-directed RNA polymerase III subunit... 38 0.081
UniRef50_A7RMB0 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.11
UniRef50_UPI0000E4A5C9 Cluster: PREDICTED: similar to CGRP-recep... 36 0.43
UniRef50_UPI000155C0D6 Cluster: PREDICTED: hypothetical protein;... 36 0.57
UniRef50_Q4RRY0 Cluster: Chromosome 7 SCAF15001, whole genome sh... 34 1.8
UniRef50_Q97FK6 Cluster: Predicted permease; n=1; Clostridium ac... 34 1.8
UniRef50_Q54TC0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q23F02 Cluster: Putative uncharacterized protein; n=2; ... 31 9.4
>UniRef50_Q2F5S9 Cluster: Calcitonin gene-related peptide-receptor
component protein; n=3; Endopterygota|Rep: Calcitonin
gene-related peptide-receptor component protein - Bombyx
mori (Silk moth)
Length = 127
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2
Query: 242 KSQFPFLCNYEVMQILQKLKDNTHKKHKREASLATVTYETV 364
K+ FLCNYEVMQILQKLKDNTHKKHKREASLATVTYETV
Sbjct: 5 KANSAFLCNYEVMQILQKLKDNTHKKHKREASLATVTYETV 45
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +1
Query: 364 HYLQDTECKNQSAQKIXKFLEAMKKYKLTKVEK 462
HYLQDTECKNQSAQKI KFLEAMKKYKLTKVEK
Sbjct: 46 HYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEK 78
>UniRef50_UPI0000DB6E76 Cluster: PREDICTED: similar to calcitonin
gene-related peptide-receptor component protein; n=1;
Apis mellifera|Rep: PREDICTED: similar to calcitonin
gene-related peptide-receptor component protein - Apis
mellifera
Length = 130
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 251 FPFLCNYEVMQILQKLKDNTHKKHKREASLATVTYETVITYKTQNAKIRVPKK 409
+ +L NYEV+ ILQ +K N +K K+ LA++TY+T+ + + KI+ P+K
Sbjct: 13 YSYLSNYEVLNILQSIKANKKQKMKQN-QLASITYQTIRYLENTSCKIQSPEK 64
Score = 41.1 bits (92), Expect = 0.012
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVE 459
YL++T CK QS +KI FL AM+ +KLTK E
Sbjct: 51 YLENTSCKIQSPEKIKDFLRAMEPFKLTKCE 81
>UniRef50_Q7PTA4 Cluster: ENSANGP00000016026; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000016026 - Anopheles gambiae
str. PEST
Length = 140
Score = 40.7 bits (91), Expect = 0.015
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVE 459
YL+DT CK QS I FL+AMK++ LTK E
Sbjct: 45 YLEDTPCKEQSTAGIIDFLQAMKEFNLTKNE 75
Score = 33.9 bits (74), Expect = 1.8
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2
Query: 260 LCNYEVMQILQKLKDNTHKKHKREASLATVTYETV 364
L NYEVM L+ +K N+ KK+ +LAT+TYETV
Sbjct: 11 LTNYEVMTALKDMK-NSKKKYGLR-NLATITYETV 43
>UniRef50_Q7KUX1 Cluster: CG4875-PB, isoform B; n=3; Sophophora|Rep:
CG4875-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 238
Score = 38.3 bits (85), Expect = 0.081
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 251 FPFLCNYEVMQILQKLKDNTHKKHKREASLATVTYETV 364
F +L N EVMQILQK+K K R +LATVTYE +
Sbjct: 8 FSYLTNLEVMQILQKIKSTKKKFGMR--NLATVTYEAL 43
>UniRef50_O75575 Cluster: DNA-directed RNA polymerase III subunit
RPC9; n=21; Euteleostomi|Rep: DNA-directed RNA
polymerase III subunit RPC9 - Homo sapiens (Human)
Length = 148
Score = 38.3 bits (85), Expect = 0.081
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVEK 462
Y+ T C++QS + + +FL A+K +KLTK EK
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEK 83
>UniRef50_A7RMB0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 160
Score = 37.9 bits (84), Expect = 0.11
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVEK 462
YL+ T CK+QS + I +FL A+ + LTK EK
Sbjct: 56 YLEKTPCKHQSPEVIEEFLRALAPFNLTKAEK 87
>UniRef50_UPI0000E4A5C9 Cluster: PREDICTED: similar to CGRP-receptor
component protein; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to CGRP-receptor
component protein - Strongylocentrotus purpuratus
Length = 148
Score = 35.9 bits (79), Expect = 0.43
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVEK 462
YL++T C Q+ + + KFL+A+ Y LTK EK
Sbjct: 59 YLENTPCGLQTPEVVEKFLQALAPYNLTKSEK 90
>UniRef50_UPI000155C0D6 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 187
Score = 35.5 bits (78), Expect = 0.57
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTK 453
Y+ T C++QS + + +FL AMK +KLTK
Sbjct: 159 YISKTPCRHQSPEIVREFLTAMKSHKLTK 187
>UniRef50_Q4RRY0 Cluster: Chromosome 7 SCAF15001, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 7
SCAF15001, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 144
Score = 33.9 bits (74), Expect = 1.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 367 YLQDTECKNQSAQKIXKFLEAMKKYKLTKVEK 462
YL T C Q + + +FL M +KLTK EK
Sbjct: 52 YLSQTPCSRQRPETVKEFLTTMMHHKLTKAEK 83
>UniRef50_Q97FK6 Cluster: Predicted permease; n=1; Clostridium
acetobutylicum|Rep: Predicted permease - Clostridium
acetobutylicum
Length = 875
Score = 33.9 bits (74), Expect = 1.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 351 VTVASEASLLCFLCVLSFNFWRICITS*LHRNGNW 247
+T+AS +LLC LC+ ++ W +TS + ++G W
Sbjct: 26 ITIAS--ALLCSLCIFIYSMWSAKVTSTIQKSGYW 58
>UniRef50_Q54TC0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1109
Score = 33.1 bits (72), Expect = 3.1
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -1
Query: 325 LMLFMCVIF*LLENLHNFIITQKWELAFIVSMFKFNTYHLVFDFSNVSLAFGLILKYIHE 146
L LFM + F +EN++N I+ + + F+V+ ++ LVF L FG ++K ++
Sbjct: 177 LYLFMTLYFTKIENMNNDIVEDIYSMLFVVATVIVSS--LVFPTLASRLIFGKVVKTLNS 234
Query: 145 GRLRF 131
R F
Sbjct: 235 TRTYF 239
>UniRef50_Q23F02 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 161
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 161 QNQAKSQ*YIREVKHQVICVEFEHGNYKS--QFPFLCNYEVMQILQKLKDNTHK 316
QN+ ++Q ++ ++Q ++ +YKS +FP L YE ++ QK +D+ K
Sbjct: 50 QNEIQNQQQSKDFENQSFSLDLSFEDYKSFSEFPSLYEYEEIEYNQKAEDDEEK 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,705,117
Number of Sequences: 1657284
Number of extensions: 6459815
Number of successful extensions: 13868
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13862
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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