Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0513
         (466 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.0  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   4.0  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   5.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   9.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 357  SYVTVASEASLLCFLCVLSFNFWRICITS*LHRNGNWL 244
            SY T+ ++ SL+ F C +  +     ITS  ++  NW+
Sbjct: 2996 SYETIKNKNSLMRFECCIDCSQDASSITSNSYKVTNWI 3033


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 167 QAKSQ*YIREVKHQVICVEFEHGNYKSQF 253
           +AK+  + R V+H V  V+F+ G  + QF
Sbjct: 243 RAKTCDWCRHVRHAVSYVDFQDGASQLQF 271


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 272  HNYTEMGIGFYSFHVQIQHISLGV 201
            H  TEMG G ++  +Q+   +LG+
Sbjct: 1024 HGGTEMGQGLHTKMIQVAATALGI 1047


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -2

Query: 462 FLNFSELVFFHSF*ELXNFLGTLIFAFCVL*VMTVSYVTVASEASLLCFLCVLSFNFW 289
           FLNF  +        + N L  L+F    L  ++ SY   A   S  C+L  L F  W
Sbjct: 40  FLNFYYMPLLVVVGSIGNILSVLVFFNTKLKKLSSSYYLAALGISDTCYLVGL-FVTW 96


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 421 GTXEFFGHSDFCILCLVSNDSLICNS 344
           GT + F  + F I C VS   L C+S
Sbjct: 23  GTGKPFLPTSFLIYCFVSPSCLECSS 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,395
Number of Sequences: 2352
Number of extensions: 6662
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)