Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0512
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   9.5  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 5   RHERTMRKSQPKTG 46
           RH ++  K QPKTG
Sbjct: 209 RHNQSRSKRQPKTG 222


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 317  FKNKCRAAREPVAQTV 270
            FKN+C   R P+  T+
Sbjct: 1745 FKNRCGEGRHPLLTTI 1760


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 302 YIYS*INKHHYFILSINY 355
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 196 VPQQLQH*NNRMRWFVCFT 140
           VP+     N   RW++C+T
Sbjct: 27  VPKITSTNNEVPRWYICYT 45


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 1   NSAREDDEKKPA 36
           N A+E+DE KP+
Sbjct: 901 NGAKEEDEDKPS 912


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 302 YIYS*INKHHYFILSINY 355
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 16  DDEKKPAENGDKNGEEP 66
           ++EKK  E  DK+ ++P
Sbjct: 229 EEEKKEEEGEDKDKDKP 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,396
Number of Sequences: 336
Number of extensions: 1225
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)