Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0512
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p pro...    29   3.9  
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    29   3.9  
AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p pro...    28   6.8  
AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-P...    28   6.8  

>BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p
           protein.
          Length = 739

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 1   NSAREDDEKKPAENGDKNGEEPPS 72
           N  +  ++KKP+EN D+  E+ PS
Sbjct: 80  NDEKASEDKKPSENNDEEDEDGPS 103


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 1   NSAREDDEKKPAENGDKNGEEPPS 72
           N  +  ++KKP+EN D+  E+ PS
Sbjct: 613 NDEKASEDKKPSENNDEEDEDGPS 636


>AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 146 AYKPPHSIILMLKLLRDARRPITVL 220
           AY P   +I   KLLR A+RP+ ++
Sbjct: 186 AYPPHDDVIRAAKLLRQAKRPLVIV 210


>AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-PA
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 146 AYKPPHSIILMLKLLRDARRPITVL 220
           AY P   +I   KLLR A+RP+ ++
Sbjct: 186 AYPPHDDVIRAAKLLRQAKRPLVIV 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,217,817
Number of Sequences: 53049
Number of extensions: 225058
Number of successful extensions: 1073
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)