Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0507
(435 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 88 9e-17
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 88 9e-17
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 85 8e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 83 2e-15
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 81 1e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 81 1e-14
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 74 1e-12
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 68 1e-10
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 68 1e-10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 2e-08
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 58 8e-08
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 56 3e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 53 3e-06
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 51 1e-05
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 50 2e-05
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 45 8e-04
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 40 0.030
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 38 0.070
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 37 0.16
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.21
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 34 1.1
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 1.1
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 34 1.1
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 34 1.1
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 34 1.5
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 3.5
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 3.5
UniRef50_Q2IEL5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 32 4.6
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 32 6.0
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 31 8.0
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 87.8 bits (208), Expect = 9e-17
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 106
Score = 39.5 bits (88), Expect = 0.030
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
K + KEW PVTKLGRLV++ KI LE
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLE 54
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 87.8 bits (208), Expect = 9e-17
Identities = 44/58 (75%), Positives = 46/58 (79%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 131
Score = 39.5 bits (88), Expect = 0.030
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
K + KEW PVTKLGRLV++ KI LE
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLE 79
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 84.6 bits (200), Expect = 8e-16
Identities = 43/58 (74%), Positives = 45/58 (77%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKE EIIDFFLG SL DEVLKIMPVQKQT A Q TRFKAFV G
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIG 71
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 83.4 bits (197), Expect = 2e-15
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFV 397
K + E+YL SLPIKE EIIDFFLG SL DEVLKIMPV+K+TRA Q TRFKAFV
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFV 56
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKE++I+D+FL P LNDEV+K++PVQKQTRA Q TRFKAFV G
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIG 104
Score = 41.9 bits (94), Expect = 0.006
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
++++KEW PVTKLGRLV+ GKI +E
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIE 53
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 80.6 bits (190), Expect = 1e-14
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFK 388
K + E+YL SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRA Q TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 39.5 bits (88), Expect = 0.030
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
K + KEW PVTKLGRLV++ KI LE
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLE 79
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 74.1 bits (174), Expect = 1e-12
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFK 388
K + E+YL SLPIK EIIDFFLG SL +EVLK MPVQKQTRA Q TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 35.5 bits (78), Expect = 0.49
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
K + KEW P TKLG LV++ KI LE
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLE 79
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + ++L SLPIKE +I++ F+G L DEV+KI PVQKQT A Q RFKAFV G
Sbjct: 64 KIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVG 121
Score = 36.7 bits (81), Expect = 0.21
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 177 EDQKEWXPVTKLGRLVREGKIDKLE 251
+D+ W P TKLGRLV++GKI LE
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLE 69
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
E++L SLP+KEF+IID L P L DEV+ I PVQKQTRA Q TRFKA V G
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVG 105
Score = 37.1 bits (82), Expect = 0.16
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 180 DQKEWXPVTKLGRLVREGKIDKLE 251
++K W PVTKLGRLV+ GKI +E
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIE 54
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFV 397
++YL SLPIKEFE+ DF LG L D+VLK+M VQKQ +A + RFK V
Sbjct: 141 KVYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIV 189
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQ 373
E+YL SLPIKE EIID FLG +L DEVLK +P QK TR Q
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ 108
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 56.0 bits (129), Expect = 3e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + ++ S+PIKE++I+D FL +L +E L I PVQKQT A Q TRFKA+V G
Sbjct: 78 KIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVG 134
Score = 37.5 bits (83), Expect = 0.12
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 183 QKEWXPVTKLGRLVREGKIDKLES 254
++EW P+TKLGRLV+ GKI LE+
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLET 84
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFV 397
++YL S PIKEFE+ DF L L D+VLK+M V+KQ A + RFK V
Sbjct: 7 KVYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIV 55
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 248 RELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAF 394
+++ + LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F
Sbjct: 11 KDIKIKYLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSF 58
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 50.0 bits (114), Expect = 2e-05
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
+++ S I+E EI+D G S+ +EVL I VQKQTRA Q TR KA V G
Sbjct: 41 QIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVG 92
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 248 RELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
+EL+ +LPI E EI+D L P L EV+ I VQKQT A + +R+K V G
Sbjct: 32 KELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMG 83
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -3
Query: 388 LETCALXGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKL 251
LE L GT L L HDL++ ++Q A+EEI+DLE F+ R QV L
Sbjct: 77 LEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDL 122
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
DEVLKIMPVQKQT A Q TRF AFV G
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIG 75
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 39.5 bits (88), Expect = 0.030
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
K + KEW PVTKLGRLV++ KI LE
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLE 79
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 38.3 bits (85), Expect = 0.070
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 183 QKEWXPVTKLGRLVREGKIDKLESFTCXLYQSKNSRSLISSSARP 317
+ +W P+TKLG LV+E KI LE S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 37.1 bits (82), Expect = 0.16
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
E LPI+E EI+D L P L+D+VL + +Q+ T + + RF G
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVG 62
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 36.7 bits (81), Expect = 0.21
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 186 KEWXPVTKLGRLVREGKIDKLESFTCXLY 272
+EW P TKLGRLV+EGKI ++ Y
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKY 33
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 34.3 bits (75), Expect = 1.1
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 192 WXPVTKLGRLVREGKIDKLE 251
W PVTKLGRLV++GK+ ++
Sbjct: 35 WTPVTKLGRLVKDGKVKSID 54
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 34.3 bits (75), Expect = 1.1
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -3
Query: 388 LETCALXGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQ 260
LE+ +L + L L R D+ N I+Q ++ +NDLEF DW R Q
Sbjct: 158 LESGSLTSSGLLLDRLDVHNFILQVW-QQLVNDLEFLDWQRVQ 199
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 34.3 bits (75), Expect = 1.1
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 251 ELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
E+ L I+E II L P L EV+ + +QK T Q TRFKA V G
Sbjct: 66 EIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATG 116
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 34.3 bits (75), Expect = 1.1
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 269 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 361
LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 31 LPLKEYQIVDYLI-PDLKDEVINIERAQRMT 60
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 33.9 bits (74), Expect = 1.5
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +2
Query: 272 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAF 394
P +II+FFLG L DEVL+ M Q Q TR K F
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQNQR-----TRIKVF 81
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 3.5
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 364 TCLFLYR-HDLKNLIIQGRAEEEIND 290
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -3
Query: 388 LETCALXGTCLFLYRHDLKNLI----IQGRAEEEIND 290
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_Q2IEL5 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 356
Score = 32.3 bits (70), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 114 YLHRVIRIRRENRHVHRLEQRPPFTNELKKLCHHSCR 4
YLH R++ E R +H L PP + ++ C+ CR
Sbjct: 294 YLHTWARLQGEKRCLHCLAPLPPDAKDSRRFCNDRCR 330
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 32.3 bits (70), Expect = 4.6
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +2
Query: 275 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
I+E II L P L EV+ + +QK T Q TRFKA V G
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAG 97
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 31.9 bits (69), Expect = 6.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 180 DQKEWXPVTKLGRLVREGKI 239
+ KEW PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 31.5 bits (68), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 189 EWXPVTKLGRLVREGKIDKLESFTCXLYQSK 281
EW P TKLG +V+EG+I + YQ K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,460,166
Number of Sequences: 1657284
Number of extensions: 4495922
Number of successful extensions: 11212
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 11037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11205
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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