Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0507
(435 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 91 6e-19
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 91 6e-19
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 91 6e-19
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 91 6e-19
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 91 6e-19
AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA... 30 1.6
BT023399-1|AAY55815.1| 315|Drosophila melanogaster IP10437p pro... 29 3.6
BT023339-1|AAY55755.1| 315|Drosophila melanogaster IP10537p pro... 29 3.6
BT023203-1|AAY55619.1| 319|Drosophila melanogaster IP10737p pro... 29 3.6
AF145660-1|AAD38635.1| 316|Drosophila melanogaster BcDNA.GH1061... 29 3.6
AE014296-721|AAF47813.1| 316|Drosophila melanogaster CG10863-PA... 29 3.6
AY071452-1|AAL49074.1| 173|Drosophila melanogaster RE53486p pro... 28 6.3
AE014298-2478|AAF48664.1| 173|Drosophila melanogaster CG4756-PA... 28 6.3
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
KED KEW PVTKLGRLVREGKI LE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLE 62
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
KED KEW PVTKLGRLVREGKI LE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLE 62
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
KED KEW PVTKLGRLVREGKI LE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLE 62
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
KED KEW PVTKLGRLVREGKI LE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLE 62
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = +2
Query: 233 KNRQTRELYLXSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAXQCTRFKAFVXXG 406
K + E+YL SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRA Q TRFKAFV G
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 174 KEDQKEWXPVTKLGRLVREGKIDKLE 251
KED KEW PVTKLGRLVREGKI LE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLE 62
>AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA
protein.
Length = 1052
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 167 ARXGRPERVGSCHQTRPSCSRRKNRQTRELYLXSLPIKEFEIIDF 301
AR RP+R G + +R +N + YL +P++ FE DF
Sbjct: 180 ARSSRPQRQGRGLRRLFESNRSQNPPSEHHYLHGVPVRRFERQDF 224
>BT023399-1|AAY55815.1| 315|Drosophila melanogaster IP10437p
protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 355 FLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKLSSLSIFPS 227
++YR D + + + E E+ND+++ D R KL L + S
Sbjct: 118 YVYRGDNEMMPTDAKGEVELNDIDYLDTWREMEKLVELGLTKS 160
>BT023339-1|AAY55755.1| 315|Drosophila melanogaster IP10537p
protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 355 FLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKLSSLSIFPS 227
++YR D + + + E E+ND+++ D R KL L + S
Sbjct: 118 YVYRGDNEMMPTDAKGEVELNDIDYLDTWREMEKLVELGLTKS 160
>BT023203-1|AAY55619.1| 319|Drosophila melanogaster IP10737p
protein.
Length = 319
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 355 FLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKLSSLSIFPS 227
++YR D + + + E E+ND+++ D R KL L + S
Sbjct: 122 YVYRGDNEMMPTDAKGEVELNDIDYLDTWREMEKLVELGLTKS 164
>AF145660-1|AAD38635.1| 316|Drosophila melanogaster BcDNA.GH10614
protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 355 FLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKLSSLSIFPS 227
++YR D + + + E E+ND+++ D R KL L + S
Sbjct: 119 YVYRGDNEMMPTDAKGEVELNDIDYLDTWREMEKLVELGLTKS 161
>AE014296-721|AAF47813.1| 316|Drosophila melanogaster CG10863-PA
protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 355 FLYRHDLKNLIIQGRAEEEINDLEFFDW*RXQVKLSSLSIFPS 227
++YR D + + + E E+ND+++ D R KL L + S
Sbjct: 119 YVYRGDNEMMPTDAKGEVELNDIDYLDTWREMEKLVELGLTKS 161
>AY071452-1|AAL49074.1| 173|Drosophila melanogaster RE53486p
protein.
Length = 173
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 206 QTRPSCSRRKNRQTRELYLXSLPIKEFEIIDFFL 307
QTR R + T + ++PIKE EII FF+
Sbjct: 119 QTRQGMKRAQLADTIMKHFKTIPIKEKEIITFFV 152
>AE014298-2478|AAF48664.1| 173|Drosophila melanogaster CG4756-PA
protein.
Length = 173
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 206 QTRPSCSRRKNRQTRELYLXSLPIKEFEIIDFFL 307
QTR R + T + ++PIKE EII FF+
Sbjct: 119 QTRQGMKRAQLADTIMKHFKTIPIKEKEIITFFV 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,663
Number of Sequences: 53049
Number of extensions: 224189
Number of successful extensions: 638
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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