Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0506
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.3  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   9.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   9.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   9.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   9.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 371 INVYKNYETLAYLHKK 324
           IN+ K+Y++   LHKK
Sbjct: 128 INLLKHYQSTTDLHKK 143


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 253 YAKKRHFNMVVDKHKFPSINSTSRFL*RY 339
           + K +  N + DKH F  +NS  ++  R+
Sbjct: 74  FHKLKLTNNISDKHGFTILNSMHKYQPRF 102


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 335  LHKKREVEFIDG 300
            +H+K+ V+F+DG
Sbjct: 1178 IHRKKIVKFLDG 1189


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 416 CDIILTQXRLMCXCIINVYKNYETLAYLH 330
           C I+     L    ++  +  Y T AYLH
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 416 CDIILTQXRLMCXCIINVYKNYETLAYLH 330
           C I+     L    ++  +  Y T AYLH
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLH 164


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 230 VFDMFIVNMRKSDI 271
           VFD+F ++ R SD+
Sbjct: 203 VFDLFYLSKRASDL 216


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 416 CDIILTQXRLMCXCIINVYKNYETLAYLH 330
           C I+     L    ++  +  Y T AYLH
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,876
Number of Sequences: 336
Number of extensions: 2253
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)