Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0501
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.          36   0.056
X03145-4|CAA26918.1|  140|Homo sapiens protein ( Human KpnI repe...    34   0.22 
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    31   2.1  
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    29   6.4  

>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 ILEHLNN-KAKT-LAIFLDLSKAFDTVSVPILLSKLEVVGIRGHLLKIFQS 473
           +++H+N  K K  + I +D  KAFD +  P +L  L  +GI G  LKI ++
Sbjct: 582 VIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRA 632


>X03145-4|CAA26918.1|  140|Homo sapiens protein ( Human KpnI
           repetitive sequence (T-betaG41) 3kb downstream of
           beta-globin gene.  ).
          Length = 140

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 ILEHLNNKAKT--LAIFLDLSKAFDTVSVPILLSKLEVVGIRGHLLKIFQS 473
           I++H+N    T  + I +D  KAFD +    +L  L  +GI G  LKI ++
Sbjct: 20  IIQHINRTKDTNHMIISIDAEKAFDKIQQCFMLKTLNKLGIDGTYLKIIRA 70


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 360 LAIFLDLSKAFDTVSVPILLSKLEVVGIRGHLLKIFQS 473
           + I +D  K FD +  P ++  L  +GI G  LK+ ++
Sbjct: 35  MIISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKA 72


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 ILEHLNN-KAKT-LAIFLDLSKAFDTVSVPILLSKLEVVGIRGHLLKIFQS 473
           +  H+N  K K  + I +D  KAF+ +    +L  L  +GI G  LKI ++
Sbjct: 13  VTHHINRTKDKNHMIISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRA 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,056,194
Number of Sequences: 237096
Number of extensions: 1079360
Number of successful extensions: 5620
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5620
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)