Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0487
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   0.71 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   6.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 0.71
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 197 LQLRKIKFYHHRYHRSRSTYLSQQIIILXMIVTTM 93
           LQ   IK  +HR HR        ++ +L +I+ T+
Sbjct: 392 LQTMNIKVNYHRVHRKIMVQSLGRVGVLVVIIGTL 426


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 0.71
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 197 LQLRKIKFYHHRYHRSRSTYLSQQIIILXMIVTTM 93
           LQ   IK  +HR HR        ++ +L +I+ T+
Sbjct: 117 LQTMNIKVNYHRVHRKIMVQSLGRVGVLVVIIGTL 151


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 35   VKKGVILRKLFLXHPXYGYS 94
            ++KG   RKL +  P YG S
Sbjct: 2052 IEKGADRRKLVMGMPMYGQS 2071



 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 35   VKKGVILRKLFLXHPXYGYS 94
            + +GV  RK+ +  P YG S
Sbjct: 1627 ISEGVPRRKIVMGMPLYGQS 1646


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 32  IVKKGVILRKLFLXHPXYGY 91
           I  KG+   KLF  H  YG+
Sbjct: 156 IAAKGLPTLKLFALHEFYGF 175


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 35  VKKGVILRKLFLXHPXYGYS 94
           VK+G    KL +  P YG S
Sbjct: 747 VKQGAPKEKLMIGMPTYGRS 766


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,875
Number of Sequences: 336
Number of extensions: 1121
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)