Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0482
(487 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 106 9e-24
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 106 9e-24
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 105 1e-23
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 105 1e-23
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 105 2e-23
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 105 2e-23
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 105 2e-23
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 105 2e-23
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 105 2e-23
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 99 8e-22
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 92 2e-19
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 89 2e-18
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 58 2e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 5e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 7e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 50 6e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 5e-05
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 36 0.011
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.058
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.13
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 29 1.3
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 29 2.2
At2g18520.1 68415.m02158 pentatricopeptide (PPR) repeat-containi... 29 2.2
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 29 2.2
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 29 2.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 3.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 3.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.1
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 106 bits (254), Expect = 9e-24
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMY 135
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 106 bits (254), Expect = 9e-24
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.3 bits (157), Expect = 5e-12
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 105 bits (253), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.3 bits (157), Expect = 5e-12
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 105 bits (253), Expect = 1e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.3 bits (157), Expect = 5e-12
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 105 bits (252), Expect = 2e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN PAMY
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 105 bits (252), Expect = 2e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Score = 101 bits (241), Expect = 3e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 105 bits (252), Expect = 2e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Score = 101 bits (241), Expect = 3e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 105 bits (252), Expect = 2e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 105 bits (252), Expect = 2e-23
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN PAMY
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 105 bits (252), Expect = 2e-23
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Score = 101 bits (241), Expect = 3e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKANREKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 99 bits (238), Expect = 8e-22
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDE +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 98.3 bits (234), Expect = 2e-21
Identities = 38/46 (82%), Positives = 45/46 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPI 106
Score = 56.8 bits (131), Expect = 7e-09
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPK NREKMTQIMFE+F P+MY
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMY 136
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 91.9 bits (218), Expect = 2e-19
Identities = 36/46 (78%), Positives = 44/46 (95%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA LNPKA+REKMTQIMFETF P+MY
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMY 90
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/61 (67%), Positives = 44/61 (72%)
Frame = +3
Query: 210 RDGRYGTEGLVRRRRAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 389
RDG E V + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 390 V 392
V
Sbjct: 94 V 94
Score = 60.1 bits (139), Expect = 8e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRA 264
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LLTEA NPKANREKMTQIMFE+F+ PAMY
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMY 124
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 383
L + YP+ +GIV NWDDME +W H FYNEL++ P +
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 252
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P LLT+ LNP NREKM + MFE +N ++
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVF 134
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
+R + + P + GIVT+WD ++ +W H F N L + P EHP+
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPM 121
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 392
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPM 127
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 374 PRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
P P LL E LN + REK ++MFE + PA++
Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALF 157
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 50.4 bits (115), Expect = 6e-07
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 225 GTEGLVRRRRAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
G E L + R + + L YPIEHG V +WD ME+ W +N LR PE+H
Sbjct: 71 GDEALAKSRSSSTHN----LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 368 CRPRGTPCLLTEAXLNPKANREKMTQIMFETFNTPAMY 481
C P LLTE+ L P +RE +I+FETFN P +Y
Sbjct: 115 CDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLY 152
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 37.5 bits (83), Expect = 0.005
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 386 PCLLTEAXLNPKANREKMTQIMFETFNTPAM 478
P L+TE NP +R KM +++FET+ PA+
Sbjct: 118 PILITECACNPVQSRSKMAELLFETYGVPAV 148
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 392 LLTEAXLNPKANREKMTQIMFETFNTPAMY 481
L T+ PKA RE++ Q+MFETFN Y
Sbjct: 92 LFTDPLCTPKAIREQLVQLMFETFNVSGFY 121
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNEL 365
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 195
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.058
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 227 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 90
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
++ PI+ G + N D +IW H F + L +AP
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAP 92
>At1g17580.1 68414.m02165 myosin, putative similar to myosin
GI:433663 from (Arabidopsis thaliana)
Length = 1520
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 371 RPRGTPCLLTEAXLNPKANREKMTQIMFETF 463
+P G LL EA + PK+ E +Q +F+TF
Sbjct: 496 KPGGIISLLDEACMFPKSTHETFSQKLFQTF 526
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 371 RPRGTPCLLTEAXLNPKANREKMTQIMFETF 463
+P G LL EA + PK+ E Q +++TF
Sbjct: 513 KPGGVIALLDEACMFPKSTHETFAQKLYQTF 543
>At2g18520.1 68415.m02158 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 418
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 201 PSGRDGRYGTEGLVRRRRAQSKRGILTL-KYPIEHGIVTNWDDMEK 335
P + ++ TEGLV+ R + RG+ + K +VT W +E+
Sbjct: 342 PDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEE 387
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 371 RPRGTPCLLTEAXLNPKANREKMTQIMFETFNT 469
+P G LL EA + PK+ E +++TF T
Sbjct: 502 KPGGIVALLDEACMFPKSTHETFANKLYQTFKT 534
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 371 RPRGTPCLLTEAXLNPKANREKMTQIMFETFNT 469
+P G LL EA + PK+ E +++TF T
Sbjct: 507 KPGGIVALLDEACMFPKSTHETFANKLYQTFKT 539
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 81
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,550,153
Number of Sequences: 28952
Number of extensions: 253510
Number of successful extensions: 749
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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