Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0479
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.2  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    20   9.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   9.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   9.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   9.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 156 IRTITVCNVCLEKINQSNKS 215
           I  + VC+VC   I ++NK+
Sbjct: 571 IDVVYVCDVCYSTIEEANKA 590


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 156 IRTITVCNVCLEKINQSNKS 215
           I  + VC+VC   I ++NK+
Sbjct: 296 IDVVYVCDVCYSTIEEANKA 315


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 305 ETXQTIYECYKLTSIIYTSSH 243
           E+ QT++ CYKL       SH
Sbjct: 301 ESQQTVFLCYKLMEKFPERSH 321


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 184 QTLQTVIVLMNYSFICDIFSENFSLILSKILTYGNGKV 71
           Q LQ     MNY+ + D++ E F+L   K L   N  V
Sbjct: 411 QHLQKTTTFMNYTDLHDLWGE-FTLKALKRLERANNGV 447


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 428 FSRWSIC 448
           FSRWS+C
Sbjct: 365 FSRWSLC 371


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 130 RCHI*SYNSLEQ*PFAMFV*KKSINQINRILYLQS 234
           RC++   +  +   F +   K  + Q NR+ Y Q+
Sbjct: 64  RCYLRPASGFQSLQFRLLENKLGVRQENRVKYNQN 98


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 130 RCHI*SYNSLEQ*PFAMFV*KKSINQINRILYLQS 234
           RC++   +  +   F +   K  + Q NR+ Y Q+
Sbjct: 124 RCYLRPASGFQSLQFRLLENKLGVRQENRVKYNQN 158


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 130 RCHI*SYNSLEQ*PFAMFV*KKSINQINRILYLQS 234
           RC++   +  +   F +   K  + Q NR+ Y Q+
Sbjct: 124 RCYLRPASGFQSLQFRLLENKLGVRQENRVKYNQN 158


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 230 KVYNYAMMYKLLMLIYNI 283
           K+YN+    KLL+L+ ++
Sbjct: 353 KLYNFNTFAKLLILVVSL 370


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 165 ITVCNVCLEKINQSNKS 215
           + +C+VC   I + +KS
Sbjct: 923 VCICHVCYSTIQEVSKS 939


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,689
Number of Sequences: 336
Number of extensions: 1659
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)