Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0465
(438 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 153 2e-36
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 135 4e-31
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 124 1e-27
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 111 8e-24
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 108 6e-23
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 100 1e-20
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 87 2e-16
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 85 5e-16
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 78 7e-14
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 5e-12
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 69 6e-11
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 68 1e-10
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 66 2e-10
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 64 1e-09
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 63 3e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 60 3e-08
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 56 3e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 54 1e-06
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 52 7e-06
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 46 4e-04
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 8e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 45 8e-04
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.001
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 41 0.010
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 39 0.041
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 39 0.041
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.12
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 37 0.16
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 36 0.38
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 0.66
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 2.7
UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 3.5
UniRef50_A0UTZ4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q59Q18 Cluster: Potential transporter; n=11; Saccharomy... 32 4.7
UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4; Endopte... 32 6.2
UniRef50_Q1DJW9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 31 8.1
UniRef50_Q7XTX3 Cluster: OSJNBa0019K04.25 protein; n=1; Oryza sa... 31 8.1
UniRef50_Q57WP2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_P10070 Cluster: Zinc finger protein GLI2; n=50; Euteleo... 31 8.1
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 153 bits (371), Expect = 2e-36
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRKGRHC
Sbjct: 61 YRVRKNTEARRKGRHC 76
Score = 39.1 bits (87), Expect = 0.041
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG FGKR+GTANARMP K LW
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLW 95
Score = 35.9 bits (79), Expect = 0.38
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 110 RDSKKIDRHLYHDLYMKCKG 129
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 135 bits (326), Expect = 4e-31
Identities = 62/78 (79%), Positives = 69/78 (88%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 206 ARVRKNTEARRKGRHCAL 259
AR RKNT ARRKGRH +
Sbjct: 61 ARCRKNTLARRKGRHMGI 78
Score = 37.5 bits (83), Expect = 0.12
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG + GKR+GTANARMP+K W
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTW 95
Score = 35.5 bits (78), Expect = 0.50
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRH+ HSLY+K KG
Sbjct: 110 RESKKIDRHMYHSLYLKVKG 129
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 124 bits (298), Expect = 1e-27
Identities = 56/70 (80%), Positives = 62/70 (88%)
Frame = +2
Query: 50 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 229
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 230 ARRKGRHCAL 259
ARRKGRH +
Sbjct: 61 ARRKGRHMGI 70
Score = 37.5 bits (83), Expect = 0.12
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG + GKR+GTANARMP+K W
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTW 87
Score = 35.5 bits (78), Expect = 0.50
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRH+ HSLY+K KG
Sbjct: 102 RESKKIDRHMYHSLYLKVKG 121
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 111 bits (266), Expect = 8e-24
Identities = 50/75 (66%), Positives = 60/75 (80%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 206 ARVRKNTEARRKGRH 250
+R RKN ARRKGRH
Sbjct: 61 SRCRKNLIARRKGRH 75
Score = 36.7 bits (81), Expect = 0.22
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG GKR+GTA+ARMPQK LW
Sbjct: 72 KGRHTGTGKRKGTADARMPQKVLW 95
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 108 bits (259), Expect = 6e-23
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 206 ARVRKNTEARRKGRHCALVREE 271
AR RK EA+ GRH + R E
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRRE 102
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRH+ LYM+AKG
Sbjct: 130 RADKKIDRHVYRDLYMRAKG 149
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 100 bits (240), Expect = 1e-20
Identities = 51/78 (65%), Positives = 59/78 (75%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 206 ARVRKNTEARRKGRHCAL 259
A KNT KGRH +
Sbjct: 61 AHCEKNT---LKGRHMVI 75
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 86.6 bits (205), Expect = 2e-16
Identities = 36/75 (48%), Positives = 53/75 (70%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 206 ARVRKNTEARRKGRH 250
R+R E + GRH
Sbjct: 61 NRIRSRKEEIKLGRH 75
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 85.4 bits (202), Expect = 5e-16
Identities = 32/75 (42%), Positives = 58/75 (77%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 206 ARVRKNTEARRKGRH 250
R R E ++KGRH
Sbjct: 61 YRARIRHEQKKKGRH 75
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 78.2 bits (184), Expect = 7e-14
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 206 ARVRKNTEARRKGRH 250
R RK EA++KGRH
Sbjct: 61 GRCRKRLEAKKKGRH 75
Score = 39.1 bits (87), Expect = 0.041
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 211 CPQKHRGT*KGSSLCFGKRRGTANARMPQKELW 309
C ++ KG + GKR GTANARMPQK++W
Sbjct: 63 CRKRLEAKKKGRHMGTGKRFGTANARMPQKKIW 95
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 5e-12
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +2
Query: 50 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 220
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 68.5 bits (160), Expect = 6e-11
Identities = 28/71 (39%), Positives = 50/71 (70%)
Frame = +2
Query: 35 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 214
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 215 RKNTEARRKGR 247
+K E R+KGR
Sbjct: 66 KKLKEQRKKGR 76
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 67.7 bits (158), Expect = 1e-10
Identities = 27/68 (39%), Positives = 47/68 (69%)
Frame = +2
Query: 44 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 223
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 224 TEARRKGR 247
E ++KGR
Sbjct: 66 HEKKKKGR 73
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 66.5 bits (155), Expect = 2e-10
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 206 ARVRKNTEARRKGRH 250
R+R A+R GRH
Sbjct: 61 GRIRARHAAKRLGRH 75
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 259 GKRRGTANARMPQKELW 309
GKRRGT ARMP K LW
Sbjct: 79 GKRRGTREARMPSKTLW 95
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 64.1 bits (149), Expect = 1e-09
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 206 ARVRKNTEARRKG 244
R R E R G
Sbjct: 61 GRARSRAEKRAYG 73
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 62.9 bits (146), Expect = 3e-09
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 38 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K + R
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSATLARR 94
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 206 ARVRK 220
R R+
Sbjct: 61 GRARE 65
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG 169
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREG 48
Score = 33.5 bits (73), Expect = 2.0
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKID+H+ HS+Y+K KG
Sbjct: 130 RDAKKIDKHMYHSMYLKCKG 149
Score = 31.9 bits (69), Expect = 6.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 256 FGKRRGTANARMPQKELW 309
+GKRRGT AR+P K LW
Sbjct: 98 YGKRRGTREARLPTKVLW 115
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +2
Query: 47 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 226
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 227 EARRKGR 247
E KGR
Sbjct: 67 EQLAKGR 73
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 51.6 bits (118), Expect = 7e-06
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = +2
Query: 44 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 206 ARVRKNTEARRKGR 247
+R RK + KGR
Sbjct: 66 SRARKAAAQKAKGR 79
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/70 (31%), Positives = 40/70 (57%)
Frame = +2
Query: 32 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 211
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 212 VRKNTEARRK 241
+ + K
Sbjct: 64 AQHKRRQKAK 73
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 8e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 53 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 184
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 44.8 bits (101), Expect = 8e-04
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 202
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 203 RARVRKNTEAR 235
R+++ + R
Sbjct: 60 GGRLKERRKKR 70
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 187 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 71
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 41.1 bits (92), Expect = 0.010
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 38 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 211
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 212 VRKNTEARRKGRHCALVREE 271
+ RRKGR + R +
Sbjct: 64 SKVRHLQRRKGRRRGMGRRK 83
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 39.1 bits (87), Expect = 0.041
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 223 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLI 113
VF+ G+D ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 127 VFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 39.1 bits (87), Expect = 0.041
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 47 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 226
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 227 EARRKGR 247
++KGR
Sbjct: 65 IKKKKGR 71
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.5 bits (83), Expect = 0.12
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 32 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 211
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 212 VRKNTEARRK 241
+ R K
Sbjct: 64 AQTKKAQRNK 73
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 37.1 bits (82), Expect = 0.16
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = +2
Query: 32 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 211
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 212 VRKNTEARRKG 244
+ ++ G
Sbjct: 62 KKLRKAKKQSG 72
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 35.9 bits (79), Expect = 0.38
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 337 IFLEPFVFVPIVPSVAYAHWQYLF-SYQSTVTTLSTCLCVFADTGAGVDCYRFLDDETIL 161
IF+EPF IV + W+ F ++ + ++T C+FAD + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFAD-ASPAKWTRLQDDDVAI 460
Query: 160 DHLTDVLSGVGVCDLIDFI 104
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 0.66
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +2
Query: 44 QKRLAASVMRCGKKKVWLDPNEINEIAN 127
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 2.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 195 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 76
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 329
Score = 32.7 bits (71), Expect = 3.5
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 59 ASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH-SRARVRKNTEAR 235
A+ + G+ +VWLDP +N + +N+ M+ +++ P V + +R + + E
Sbjct: 117 AAALTYGESEVWLDPYALNRVRQDGKLKNVGLMLGWSEILETPFRVSINYSRQKLDNEQS 176
Query: 236 RKGRHCALVREEVLPMRVCHRRNYG 310
+ + +L + +L + NYG
Sbjct: 177 GQAQGASLANQALLKR---NGNNYG 198
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 3.5
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 223 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 104
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_A0UTZ4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 505
Score = 32.3 bits (70), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 295 VAYAHWQYLFSYQSTVTTLSTCLCVFADTGAGV 197
V Y+ WQY +SY T TT+ TC +++ GV
Sbjct: 110 VPYSCWQYSYSYACTGTTVDTCGQYRSNSACGV 142
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 4.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 83 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 190
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
>UniRef50_Q59Q18 Cluster: Potential transporter; n=11;
Saccharomycetales|Rep: Potential transporter - Candida
albicans (Yeast)
Length = 609
Score = 32.3 bits (70), Expect = 4.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 373 LSIFLXVLTSGAIFLEPFVFVPIVPSVAYAHWQYLFSYQSTVTTLSTCLCVFADTGAGVD 194
L +L VLTSG L + + + +A WQ++F ++ + + + G D
Sbjct: 273 LGQYLGVLTSG--LLSGAIVRHLDGAAGHAAWQWIFIIDGIISVVIGIIGFYMIPGTPQD 330
Query: 193 CYR-FLDDETI 164
CY FL DE I
Sbjct: 331 CYSIFLSDEEI 341
>UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4;
Endopterygota|Rep: 60S ribosomal protein L14 - Aedes
aegypti (Yellowfever mosquito)
Length = 229
Score = 31.9 bits (69), Expect = 6.2
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 23 RMSSLKLQKRLAASVMRCG-----KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 187
+ S+ + Q+R AA RC + K+ L +E N I + ++ ++++ +G++ KP
Sbjct: 136 KFSTTRWQERAAAKAKRCNLTDFDRFKLRLARSERNRIVSAQFKKLKKEVVNNGMLFGKP 195
Query: 188 VAVHSRARVRKNTEARRKGRHCALVREEVLPMR 286
V R+N +++G+ + + + P +
Sbjct: 196 VKGTKPLPKRRNPIPKKEGKKKRVRKNKKAPAK 228
>UniRef50_Q1DJW9 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1204
Score = 31.9 bits (69), Expect = 6.2
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +2
Query: 83 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCALV 262
K + DP++ + + T ++N+ K+ +G ++ P+ S E +++GR
Sbjct: 166 KYAFKDPHK-DSLCETPRKENVLKLNPNGKLLNSPIQQASSGTRENGGELKKRGRGRKKP 224
Query: 263 REEVLPMRVCHRRNYG 310
+E+V P+ YG
Sbjct: 225 KEDVAPLSRIAIMKYG 240
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 196 DCYRFLDDETILDHLTDVLSGVGVCDLIDFI 104
D +R DD+ I D L D+L+GVG+ + I
Sbjct: 159 DSHRLPDDQAIFDQLPDLLTGVGIGNFFGLI 189
>UniRef50_Q7XTX3 Cluster: OSJNBa0019K04.25 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0019K04.25
protein - Oryza sativa subsp. japonica (Rice)
Length = 276
Score = 31.5 bits (68), Expect = 8.1
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +2
Query: 128 TNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCALVREEVLPMRVCH 295
++S Q R+ ++ L + KP A RV +++ RR+ R A+V V+P+R+CH
Sbjct: 39 SSSVQQPRRRLRPRLRVVKPCA----GRVSSSSKDRRRSRPLAIV--SVVPVRLCH 88
>UniRef50_Q57WP2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 891
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 340 AIFLEPFVFVPIVPSVAYAHWQYLFSYQSTVTTLSTCLC 224
A+ L+ P+VP+V A W+ L SY+ T +L+ LC
Sbjct: 391 AVILQNVFAPPLVPTVEQAKWR-LHSYEETFRSLNILLC 428
>UniRef50_P10070 Cluster: Zinc finger protein GLI2; n=50;
Euteleostomi|Rep: Zinc finger protein GLI2 - Homo
sapiens (Human)
Length = 1258
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 101 PNEINEIANTNSRQNIRKMIKDGLVIK--KPVAVHSRARVRKNTEARRKGRHCALVREEV 274
P +++ +N S N K + V PVA+H R++V+ E R AL + +V
Sbjct: 10 PTQLSSSSNCLSDTNQNKQSSESAVSSTVNPVAIHKRSKVKTEPEGLRPASPLALTQGQV 69
Query: 275 L 277
L
Sbjct: 70 L 70
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,123,971
Number of Sequences: 1657284
Number of extensions: 9211865
Number of successful extensions: 24961
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 24227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24952
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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