Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0465
         (438 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.6  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   4.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   6.3  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    22   8.3  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 74   CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 187
            CG K++ +DP    E+        +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 125 NTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 217
           N ++   +R  IK+GL + +PVA + RA  R
Sbjct: 370 NMHNLPYLRACIKEGLRMYQPVAGNMRAAGR 400


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 9    DLTVSG*VPSSCRRGLQPLLCDVVKR 86
            +LT+   VP+ C  G Q  +C ++K+
Sbjct: 1107 ELTIHRYVPARCGAGCQDRVCILLKK 1132


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 168 PSLIILRMFCLELVF 124
           PSL++ R FC ++V+
Sbjct: 4   PSLLLFRQFCRDIVW 18


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 391 SEWXRCLSIFLXVLTSGAIFLEPFVFVPIVPSVAY 287
           +EW +  + F   +TS  +FL   V + I   ++Y
Sbjct: 274 TEWDQHGNNFATKMTSNVVFLGAIVLLVITSRLSY 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,665
Number of Sequences: 2352
Number of extensions: 9716
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)