Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0465
(438 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 153 1e-37
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 153 1e-37
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 153 1e-37
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 153 1e-37
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 150 7e-37
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 30 1.6
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 3.7
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 3.7
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 3.7
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 3.7
AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p pro... 28 4.8
AE013599-2581|AAM68475.1| 166|Drosophila melanogaster CG30323-P... 28 6.4
BT003555-1|AAO39559.1| 1322|Drosophila melanogaster LP09268p pro... 27 8.4
AE014134-1199|AAF52464.1| 611|Drosophila melanogaster CG13775-P... 27 8.4
AE013599-3397|AAF46847.1| 1303|Drosophila melanogaster CG6339-PA... 27 8.4
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 153 bits (371), Expect = 1e-37
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRKGRHC
Sbjct: 66 YRVRKNTEARRKGRHC 81
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG FGKR+GTANARMP K LW
Sbjct: 77 KGRHCGFGKRKGTANARMPTKLLW 100
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 115 RDSKKIDRHLYHDLYMKCKG 134
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 153 bits (371), Expect = 1e-37
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRKGRHC
Sbjct: 79 YRVRKNTEARRKGRHC 94
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG FGKR+GTANARMP K LW
Sbjct: 90 KGRHCGFGKRKGTANARMPTKLLW 113
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 128 RDSKKIDRHLYHDLYMKCKG 147
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 153 bits (371), Expect = 1e-37
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRKGRHC
Sbjct: 61 YRVRKNTEARRKGRHC 76
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG FGKR+GTANARMP K LW
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLW 95
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 110 RDSKKIDRHLYHDLYMKCKG 129
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 153 bits (371), Expect = 1e-37
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRKGRHC
Sbjct: 61 YRVRKNTEARRKGRHC 76
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 238 KGSSLCFGKRRGTANARMPQKELW 309
KG FGKR+GTANARMP K LW
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLW 95
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 110 RDSKKIDRHLYHDLYMKCKG 129
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 150 bits (364), Expect = 7e-37
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = +2
Query: 26 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 205
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 206 ARVRKNTEARRKGRHC 253
RVRKNTEARRK RHC
Sbjct: 61 YRVRKNTEARRKDRHC 76
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 256 FGKRRGTANARMPQKELW 309
FGKR+GTANARMP K LW
Sbjct: 78 FGKRKGTANARMPTKLLW 95
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 351 RTXKKIDRHLXHSLYMKAKG 410
R KKIDRHL H LYMK KG
Sbjct: 110 RDSKKIDRHLYHDLYMKCKG 129
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 347 FRSNFLRTLCLCTHSSFCGIRALAV 273
F NF TLC C +S FCG A V
Sbjct: 1352 FYKNFAFTLCHCWYSLFCGFSAQTV 1376
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 113 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 214
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 113 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 214
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 113 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 214
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 113 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 214
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p
protein.
Length = 222
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 18 VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 104
V+ +P +RG++P L CD VK GWI+
Sbjct: 55 VAALIPEFQKRGVKPIALSCDTVKSHKGWIE 85
>AE013599-2581|AAM68475.1| 166|Drosophila melanogaster CG30323-PA
protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 238 STCLCVFADTGAGVDCYRFLDDETILDH-LTDVLSGVGVCD 119
S CLC+ + TG G C + L DH L V V CD
Sbjct: 75 SRCLCMTSYTGRGNMCQQDLGSPLFCDHFLYGVARRVHTCD 115
>BT003555-1|AAO39559.1| 1322|Drosophila melanogaster LP09268p
protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 83 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK-NTEARRKGRHCAL 259
KK+ + NE+NE+ + ++ ++ IKD + KK ++ + +K + + G L
Sbjct: 486 KKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKL 545
Query: 260 VREEVLPMRVCHRRN 304
V E L + ++N
Sbjct: 546 VAECSLKQKELDKKN 560
>AE014134-1199|AAF52464.1| 611|Drosophila melanogaster CG13775-PA
protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 280 WQYLFSYQSTVTTLSTCLCVFADTGAGVDCYR 185
WQY + TV T C ++ G G C R
Sbjct: 9 WQYFYKTSGTVATCLLCNRNYSRRGRGTTCLR 40
>AE013599-3397|AAF46847.1| 1303|Drosophila melanogaster CG6339-PA
protein.
Length = 1303
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 83 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK-NTEARRKGRHCAL 259
KK+ + NE+NE+ + ++ ++ IKD + KK ++ + +K + + G L
Sbjct: 482 KKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKL 541
Query: 260 VREEVLPMRVCHRRN 304
V E L + ++N
Sbjct: 542 VAECSLKQKELDKKN 556
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,802,246
Number of Sequences: 53049
Number of extensions: 450175
Number of successful extensions: 1356
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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