Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0464
         (482 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   5.5  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    22   9.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   9.6  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 KSIDISMVKRVNHCVNSHKTSYAQNVKQIDN 211
           +S+D   + + NH + SH     ++ ++ DN
Sbjct: 217 QSVDTQTLSQANHWLKSHGDRLLEDRQRFDN 247


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 297 IDISMVKRVNHCVNSHKTSYAQNVKQ 220
           +D++++ R NH + +  +SY+  VK+
Sbjct: 339 LDLAILGRANHFIGNCISSYSAFVKR 364


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 210 RYLFVSHFEHSLSYVSLH 263
           R LF+SH++    Y SLH
Sbjct: 389 RCLFISHWQEEGVYWSLH 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,937
Number of Sequences: 2352
Number of extensions: 5417
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)