Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0460
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA bin... 43 3e-04
BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing T... 43 3e-04
BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing T... 43 3e-04
BC014676-1|AAH14676.1| 250|Homo sapiens Unknown (protein for IM... 43 3e-04
AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing t... 43 3e-04
AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein. 43 3e-04
D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein. 36 0.069
BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing T... 36 0.069
BC009454-1|AAH09454.1| 387|Homo sapiens Unknown (protein for IM... 36 0.069
BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing T... 36 0.069
BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for IM... 36 0.069
AF275798-1|AAG23814.1| 171|Homo sapiens PNAS-102 protein. 36 0.069
>U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA
binding protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 462 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 520
Query: 250 LA 255
LA
Sbjct: 521 LA 522
>BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 462 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 520
Query: 250 LA 255
LA
Sbjct: 521 LA 522
>BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 462 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 520
Query: 250 LA 255
LA
Sbjct: 521 LA 522
>BC014676-1|AAH14676.1| 250|Homo sapiens Unknown (protein for
IMAGE:4158571) protein.
Length = 250
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 173 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 231
Query: 250 LA 255
LA
Sbjct: 232 LA 233
>AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing
t-complex polypeptide 1, delta subunit protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 462 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 520
Query: 250 LA 255
LA
Sbjct: 521 LA 522
>AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
PSTLAENAGLNPI TVTEL +++ E V+ PL V+ SAL
Sbjct: 462 PSTLAENAGLNPISTVTEL-RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALT 520
Query: 250 LA 255
LA
Sbjct: 521 LA 522
>D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein.
Length = 553
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 471 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 530
Query: 250 LA 255
LA
Sbjct: 531 LA 532
>BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 459 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 518
Query: 250 LA 255
LA
Sbjct: 519 LA 520
>BC009454-1|AAH09454.1| 387|Homo sapiens Unknown (protein for
IMAGE:3534054) protein.
Length = 387
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 305 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 364
Query: 250 LA 255
LA
Sbjct: 365 LA 366
>BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 459 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 518
Query: 250 LA 255
LA
Sbjct: 519 LA 520
>BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for
IMAGE:3543711) protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 457 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 516
Query: 250 LA 255
LA
Sbjct: 517 LA 518
>AF275798-1|AAG23814.1| 171|Homo sapiens PNAS-102 protein.
Length = 171
Score = 35.5 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 70 PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
P L+EN+G+NPI+T+TE+ DM+ +HV+ L ++
Sbjct: 89 PMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQIS 148
Query: 250 LA 255
LA
Sbjct: 149 LA 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,019,032
Number of Sequences: 237096
Number of extensions: 271159
Number of successful extensions: 390
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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