Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0460
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128484-1|AAM75077.1|  533|Drosophila melanogaster RE61939p pro...    46   3e-05
AE014134-2227|AAF53210.1|  533|Drosophila melanogaster CG5525-PA...    46   3e-05
AF172635-1|AAD46928.1|  542|Drosophila melanogaster GM12270p pro...    37   0.012
AE013599-1409|AAM71027.1|  512|Drosophila melanogaster CG8439-PB...    37   0.012
AE013599-1408|AAF58565.1|  542|Drosophila melanogaster CG8439-PA...    37   0.012

>AY128484-1|AAM75077.1|  533|Drosophila melanogaster RE61939p
           protein.
          Length = 533

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 28/62 (45%), Positives = 34/62 (54%)
 Frame = +1

Query: 70  PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
           PSTLAENAGLNPI TVTEL                     TD+  E+V+ PL V+ S++ 
Sbjct: 455 PSTLAENAGLNPIATVTEL-RNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSIT 513

Query: 250 LA 255
           LA
Sbjct: 514 LA 515


>AE014134-2227|AAF53210.1|  533|Drosophila melanogaster CG5525-PA
           protein.
          Length = 533

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 28/62 (45%), Positives = 34/62 (54%)
 Frame = +1

Query: 70  PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
           PSTLAENAGLNPI TVTEL                     TD+  E+V+ PL V+ S++ 
Sbjct: 455 PSTLAENAGLNPIATVTEL-RNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSIT 513

Query: 250 LA 255
           LA
Sbjct: 514 LA 515


>AF172635-1|AAD46928.1|  542|Drosophila melanogaster GM12270p
           protein.
          Length = 542

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +1

Query: 70  PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
           P  LAEN+GL+PIET++EL                     +DM++ +V+  LH     + 
Sbjct: 460 PLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQIL 519

Query: 250 LAPXL 264
           L+  L
Sbjct: 520 LSTQL 524


>AE013599-1409|AAM71027.1|  512|Drosophila melanogaster CG8439-PB,
           isoform B protein.
          Length = 512

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +1

Query: 70  PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
           P  LAEN+GL+PIET++EL                     +DM++ +V+  LH     + 
Sbjct: 430 PLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQIL 489

Query: 250 LAPXL 264
           L+  L
Sbjct: 490 LSTQL 494


>AE013599-1408|AAF58565.1|  542|Drosophila melanogaster CG8439-PA,
           isoform A protein.
          Length = 542

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +1

Query: 70  PSTLAENAGLNPIETVTELXXXXXXXXXXXXXXXXXXXXXTDMRTEHVLXPLHVTASALA 249
           P  LAEN+GL+PIET++EL                     +DM++ +V+  LH     + 
Sbjct: 460 PLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQIL 519

Query: 250 LAPXL 264
           L+  L
Sbjct: 520 LSTQL 524


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,808,998
Number of Sequences: 53049
Number of extensions: 87951
Number of successful extensions: 151
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)