Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0459
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein. 31 2.1
AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein. 31 2.1
AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein. 31 2.1
AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envel... 31 2.1
AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein. 31 2.1
D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase pr... 30 4.9
BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase ... 30 4.9
BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase ... 30 4.9
AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein. 30 4.9
AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein. 30 4.9
U09587-1|AAA57001.1| 685|Homo sapiens glycyl-tRNA synthetase pr... 29 6.5
U09510-1|AAA86443.1| 685|Homo sapiens glycyl-tRNA synthetase pr... 29 6.5
>BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQ 471
W + + K+ + REI+ DPK E +A LR + EQ
Sbjct: 1159 WALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQ 1198
>AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQ 471
W + + K+ + REI+ DPK E +A LR + EQ
Sbjct: 1159 WALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQ 1198
>AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQ 471
W + + K+ + REI+ DPK E +A LR + EQ
Sbjct: 1159 WALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQ 1198
>AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envelope
precursor protein.
Length = 1756
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQ 471
W + + K+ + REI+ DPK E +A LR + EQ
Sbjct: 1159 WALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQ 1198
>AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein.
Length = 1426
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQ 471
W + + K+ + REI+ DPK E +A LR + EQ
Sbjct: 829 WALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQ 868
>D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase
protein.
Length = 739
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 379 IKIPNPFREIIMADPKIEEILAPLRANVKEQGDL 480
I +P M EE+LAPLR V++QGDL
Sbjct: 44 ISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDL 77
>BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 379 IKIPNPFREIIMADPKIEEILAPLRANVKEQGDL 480
I +P M EE+LAPLR V++QGDL
Sbjct: 44 ISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDL 77
>BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 379 IKIPNPFREIIMADPKIEEILAPLRANVKEQGDL 480
I +P M EE+LAPLR V++QGDL
Sbjct: 44 ISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDL 77
>AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein.
Length = 847
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 169 LLTPRGHRPANKIVHMHKLRIDSDNRSQLMRHVLSLVYKCSVFSKQVTVFSNHLRLSHSQ 348
L+T GH +K H ++L I+ +++ Q RH+ +L+ K + + + + L +SHSQ
Sbjct: 739 LITKLGHLLESKENHCNRL-IEENDKYQ--RHLGNLIKKVTSYEEIIECADQRLAISHSQ 795
>AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein.
Length = 545
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 169 LLTPRGHRPANKIVHMHKLRIDSDNRSQLMRHVLSLVYKCSVFSKQVTVFSNHLRLSHSQ 348
L+T GH +K H ++L I+ +++ Q RH+ +L+ K + + + + L +SHSQ
Sbjct: 437 LITKLGHLLESKENHCNRL-IEENDKYQ--RHLGNLIKKVTSYEEIIECADQRLAISHSQ 493
>U09587-1|AAA57001.1| 685|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 685
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 430 EEILAPLRANVKEQGDL 480
EE+LAPLR V++QGDL
Sbjct: 7 EEVLAPLRLAVRQQGDL 23
>U09510-1|AAA86443.1| 685|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 685
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 430 EEILAPLRANVKEQGDL 480
EE+LAPLR V++QGDL
Sbjct: 7 EEVLAPLRLAVRQQGDL 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,090,167
Number of Sequences: 237096
Number of extensions: 975094
Number of successful extensions: 1682
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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