Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0459
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2469|AAN11786.1|  765|Drosophila melanogaster CG6778-PB...    50   1e-06
AY051413-1|AAK92837.1|  679|Drosophila melanogaster GH09263p pro...    32   0.47 
AE014296-2470|AAF49668.2|  679|Drosophila melanogaster CG6778-PA...    32   0.47 
AE014296-3442|AAF51653.2|  445|Drosophila melanogaster CG11456-P...    29   3.3  

>AE014296-2469|AAN11786.1|  765|Drosophila melanogaster CG6778-PB,
           isoform B protein.
          Length = 765

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = +1

Query: 352 WGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQGDL 480
           WG+ K +RK+K+ +   E IM++P+IE  LAPLR  V+EQG+L
Sbjct: 67  WGTKKQNRKVKLRSAAAEFIMSNPEIEAQLAPLRERVQEQGNL 109


>AY051413-1|AAK92837.1|  679|Drosophila melanogaster GH09263p
           protein.
          Length = 679

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 412 MADPKIEEILAPLRANVKEQGDL 480
           M++P+IE  LAPLR  V+EQG+L
Sbjct: 1   MSNPEIEAQLAPLRERVQEQGNL 23


>AE014296-2470|AAF49668.2|  679|Drosophila melanogaster CG6778-PA,
           isoform A protein.
          Length = 679

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 412 MADPKIEEILAPLRANVKEQGDL 480
           M++P+IE  LAPLR  V+EQG+L
Sbjct: 1   MSNPEIEAQLAPLRERVQEQGNL 23


>AE014296-3442|AAF51653.2|  445|Drosophila melanogaster CG11456-PA
           protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 205 IVHMHKLRIDS-DNRSQLMRHVLSLVYKCSVFSKQVTVFSNHLRLSHSQQW 354
           ++H H+ R DS D RS L         +C  F  Q      H+RL+H++ +
Sbjct: 301 VLHKHRQRHDSQDTRSSLK------CSQCDYFCIQANALKRHMRLNHAEAY 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,044,242
Number of Sequences: 53049
Number of extensions: 307681
Number of successful extensions: 783
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)