Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0457
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069582-1|AAL39727.1|  214|Drosophila melanogaster LD32260p pro...    31   0.63 
AE014297-1760|AAF54989.1|  214|Drosophila melanogaster CG9288-PA...    31   0.63 

>AY069582-1|AAL39727.1|  214|Drosophila melanogaster LD32260p
           protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 312 DNLKTFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSH 446
           ++  +  +R+F++ Y    D        +++HSNRI L+ LAP H
Sbjct: 35  EDYPSVVDRFFTRYYYFKGDV----PYQVLYHSNRICLICLAPEH 75


>AE014297-1760|AAF54989.1|  214|Drosophila melanogaster CG9288-PA
           protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 312 DNLKTFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSH 446
           ++  +  +R+F++ Y    D        +++HSNRI L+ LAP H
Sbjct: 35  EDYPSVVDRFFTRYYYFKGDV----PYQVLYHSNRICLICLAPEH 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,186
Number of Sequences: 53049
Number of extensions: 334388
Number of successful extensions: 760
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)