Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0454
(487 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 0.99
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 1.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 5.3
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.3
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.2
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.8 bits (49), Expect = 0.99
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 461 SNLNKNAGMFCRTRKSRYRCH 399
SN N N MFC T Y H
Sbjct: 264 SNNNNNGDMFCHTGLGHYGHH 284
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.0 bits (47), Expect = 1.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 444 CGHVLSHKEKPI*M 403
C H L+HK KPI M
Sbjct: 570 CSHHLTHKGKPIRM 583
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 282 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 341
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 342 LYYNINYIEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 282 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 341
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 342 LYYNINYIEQI 352
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.3
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 455 LNKNAGMFCRTRKSRYRCHKNKSLSHLFKKDSDISRPNCHC*RYKRKNEYREPKKH-YEV 279
L KN + + R++ +N++ K+ IS N Y N Y KH Y
Sbjct: 49 LYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNK 108
Query: 278 FLFDFISIKMI 246
++ I+ I
Sbjct: 109 LYYNINYIEQI 119
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 5.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 284 RNVSWVLDIHFFFYNASNGN 343
+N SW + +FF+++ GN
Sbjct: 206 KNDSWRITHNFFYFDPRYGN 225
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 299 VLDIHFFFYNASN 337
VLD ++FY+ SN
Sbjct: 24 VLDFDYYFYDYSN 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,193
Number of Sequences: 438
Number of extensions: 2526
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -