Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0447
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   4.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 365 YIFISVTRCYSWKFQNYSDY 424
           Y     + C+ W +Q+Y  Y
Sbjct: 115 YCLFVASNCFFWSYQSYMSY 134


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 365 YIFISVTRCYSWKFQNYSDY 424
           Y     + C+ W +Q+Y  Y
Sbjct: 115 YCLFVASNCFFWSYQSYMSY 134


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 45  PIKFEHTCQANERRVQDILVCLQNCPTQ 128
           PIKF      N   ++  L  L+N P+Q
Sbjct: 428 PIKFGRKADPNGDYIRKYLPVLKNMPSQ 455


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 175 NLLNFAIGNHNNIYDYS 225
           ++LN  + +H+N+Y YS
Sbjct: 272 SMLNSHMKSHSNVYRYS 288


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 175 NLLNFAIGNHNNIYDYS 225
           ++LN  + +H+N+Y YS
Sbjct: 30  SMLNSHMKSHSNVYRYS 46


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 175 NLLNFAIGNHNNIYDYSSILI 237
           NL+N ++G HN    ++ ++I
Sbjct: 22  NLINKSLGKHNLQKSFAKVVI 42


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 175 NLLNFAIGNHNNIYDYSSILI 237
           NL+N ++G HN    ++ ++I
Sbjct: 22  NLINKSLGKHNLQKSFAKVVI 42


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 175 NLLNFAIGNHNNIYDYSSILI 237
           NL+N ++G HN    ++ ++I
Sbjct: 22  NLINKSLGKHNLQKSFAKVVI 42


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 361 RIYLYFSYSLLFVEI 405
           R+Y Y+S++LL   I
Sbjct: 317 RLYFYWSFALLITRI 331


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 340  HSIIIYIRIYLYFSYSLLFVEISK 411
            ++ I  +R  +YF Y + F ++SK
Sbjct: 1017 YATIQEVRAKIYFFYLVKFYKVSK 1040


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 340 HSIIIYIRIYLYFSYSLLFVEISK 411
           ++ I  +R  +YF Y + F ++SK
Sbjct: 298 YATIQEVRAKIYFFYLVKFYKVSK 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,580
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)