Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0447
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor pote... 34 0.30
BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor pote... 34 0.30
AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein. 34 0.30
AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein. 34 0.30
BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocy... 31 2.8
AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene... 31 2.8
AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4 de... 31 2.8
AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein. 31 2.8
M59499-1|AAA59526.1| 304|Homo sapiens lipoprotein-associated co... 29 8.6
M58650-1|AAA59480.1| 304|Homo sapiens lipoprotein associated co... 29 8.6
J03225-1|AAA52022.1| 304|Homo sapiens TFPI protein. 29 8.6
BC015514-1|AAH15514.1| 251|Homo sapiens tissue factor pathway i... 29 8.6
AY263365-1|AAO89075.1| 304|Homo sapiens tissue factor pathway i... 29 8.6
AF021834-1|AAD01700.1| 251|Homo sapiens tissue factor pathway i... 29 8.6
AC007319-2|AAY14807.1| 304|Homo sapiens unknown protein. 29 8.6
AB209866-1|BAD93103.1| 201|Homo sapiens tissue factor pathway i... 29 8.6
>BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor potential
cation channel, subfamily M, member 5 protein.
Length = 1165
Score = 33.9 bits (74), Expect = 0.30
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 269 SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 433
S PS++A W + +L+ F L V + L++ F Y F + WKFQ Y+ Y
Sbjct: 945 SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004
Query: 434 HKIKILSPRF 463
H+ L+P F
Sbjct: 1005 HERPALAPPF 1014
>BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor potential
cation channel, subfamily M, member 5 protein.
Length = 1165
Score = 33.9 bits (74), Expect = 0.30
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 269 SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 433
S PS++A W + +L+ F L V + L++ F Y F + WKFQ Y+ Y
Sbjct: 945 SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004
Query: 434 HKIKILSPRF 463
H+ L+P F
Sbjct: 1005 HERPALAPPF 1014
>AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein.
Length = 1159
Score = 33.9 bits (74), Expect = 0.30
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 269 SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 433
S PS++A W + +L+ F L V + L++ F Y F + WKFQ Y+ Y
Sbjct: 939 SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 998
Query: 434 HKIKILSPRF 463
H+ L+P F
Sbjct: 999 HERPALAPPF 1008
>AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein.
Length = 1165
Score = 33.9 bits (74), Expect = 0.30
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 269 SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 433
S PS++A W + +L+ F L V + L++ F Y F + WKFQ Y+ Y
Sbjct: 945 SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004
Query: 434 HKIKILSPRF 463
H+ L+P F
Sbjct: 1005 HERPALAPPF 1014
>BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocyte
homolog 1, lipid desaturase (Drosophila) protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 166 GRMNLLNFAIGNHNNIYDYSSILIKSI*LTR 258
G +NLL F +G HN +D+ +I KS+ L R
Sbjct: 247 GPLNLLTFNVGYHNEHHDFPNIPGKSLPLVR 277
>AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene 15
protein protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 166 GRMNLLNFAIGNHNNIYDYSSILIKSI*LTR 258
G +NLL F +G HN +D+ +I KS+ L R
Sbjct: 247 GPLNLLTFNVGYHNEHHDFPNIPGKSLPLVR 277
>AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4
desaturase protein DES1 protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 166 GRMNLLNFAIGNHNNIYDYSSILIKSI*LTR 258
G +NLL F +G HN +D+ +I KS+ L R
Sbjct: 247 GPLNLLTFNVGYHNEHHDFPNIPGKSLPLVR 277
>AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 166 GRMNLLNFAIGNHNNIYDYSSILIKSI*LTR 258
G +NLL F +G HN +D+ +I KS+ L R
Sbjct: 247 GPLNLLTFNVGYHNEHHDFPNIPGKSLPLVR 277
>M59499-1|AAA59526.1| 304|Homo sapiens lipoprotein-associated
coagulation inhibitor protein.
Length = 304
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>M58650-1|AAA59480.1| 304|Homo sapiens lipoprotein associated
coagulation inhibitor protein.
Length = 304
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>J03225-1|AAA52022.1| 304|Homo sapiens TFPI protein.
Length = 304
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>BC015514-1|AAH15514.1| 251|Homo sapiens tissue factor pathway
inhibitor (lipoprotein-associated coagulation inhibitor)
protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>AY263365-1|AAO89075.1| 304|Homo sapiens tissue factor pathway
inhibitor (lipoprotein-associated coagulation inhibitor)
protein.
Length = 304
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>AF021834-1|AAD01700.1| 251|Homo sapiens tissue factor pathway
inhibitor beta protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>AC007319-2|AAY14807.1| 304|Homo sapiens unknown protein.
Length = 304
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 87 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 125
>AB209866-1|BAD93103.1| 201|Homo sapiens tissue factor pathway
inhibitor (lipoprotein-associated coagulation inhibitor)
protein.
Length = 201
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 CQANERRVQDILVCLQNCPTQKRQPSKFHIKMTRQNESPQFC 191
C+ N+ R + + C + C R + IK T Q E P FC
Sbjct: 98 CEGNQNRFESLEECKKMCT---RDNANRIIKTTLQQEKPDFC 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,604,254
Number of Sequences: 237096
Number of extensions: 1140353
Number of successful extensions: 1839
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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