Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0443
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   1.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   3.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   3.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   3.4  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   4.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.5  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   4.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   5.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.8  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 96  DRTLWS*L*EQVSNLP*VYSGT 31
           D +LW  L  Q+SNL   + GT
Sbjct: 515 DYSLWKALIFQISNLQTTFGGT 536



 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
 Frame = +3

Query: 51  EDWKPVLTVNSI---VYGLQ 101
           E  KP+LT+NS+   +Y L+
Sbjct: 344 ESIKPLLTLNSVPTEIYNLE 363


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = +3

Query: 57  WKPVLTVNSIVYGLQYLFLEPNPEDP 134
           W P  T  +     +Y    P P DP
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDP 133


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 30   VCLNILREDWKPV 68
            +C N++++ WK V
Sbjct: 2107 ICTNVIKKGWKVV 2119


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 127 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 252
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 213 KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 254



 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 217 TSAHLISNDASNE 255
           +S +LI N+ASNE
Sbjct: 335 SSTNLIQNEASNE 347


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 127 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 252
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 43



 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 217 TSAHLISNDASNE 255
           +S +LI N+ASNE
Sbjct: 124 SSTNLIQNEASNE 136


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 127 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 252
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 43



 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 217 TSAHLISNDASNE 255
           +S +LI N+ASNE
Sbjct: 124 SSTNLIQNEASNE 136


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 153 DELQSNRRLFEQHVQRAMRGG 215
           D +  N+RLF+ ++Q  ++ G
Sbjct: 31  DAILHNKRLFDNYLQCLLKKG 51


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 52  KIGNLFSQLTP*CTVSSIYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRE 201
           KIG L +   P   + +   ++ T   P  RK+    K+   FSNN   E
Sbjct: 205 KIGQLLTYRAPRPWIHNETIYSLT---PQGRKEQKVLKSLHSFSNNVIAE 251


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 153 DELQSNRRLFEQHVQRAMRGG 215
           D +  N+RLF+ ++Q  ++ G
Sbjct: 31  DAILHNKRLFDNYLQCLLKKG 51


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 52  KIGNLFSQLTP*CTVSSIYSWNQTLK--IPSTRKQLTSSKATGDFSNNTFRE 201
           KIG L +   P       + +N+T+    P  RK+    K+   FSNN   E
Sbjct: 205 KIGQLLTYRAP-----RPWIYNETIYSLTPQGRKEQKVLKSLHSFSNNVIAE 251


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 294 IYMVVSIFYTCAGFI 250
           I++VVSIFY  A  I
Sbjct: 246 IFIVVSIFYMSAYLI 260


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 199 ELCEAATSAHLISNDA 246
           EL   A  AHL SN+A
Sbjct: 580 ELARKAAFAHLNSNEA 595


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,270
Number of Sequences: 336
Number of extensions: 1462
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)