Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0443
(332 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 49 1e-06
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 49 1e-06
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 48 1e-06
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 47 4e-06
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 46 1e-05
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 44 4e-05
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 38 0.002
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.019
SB_10913| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.3) 28 1.6
SB_51158| Best HMM Match : VWD (HMM E-Value=0.058) 28 1.6
SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_19955| Best HMM Match : AFP (HMM E-Value=0.14) 27 3.8
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 27 5.0
SB_24495| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_12549| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 26 8.8
SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20) 26 8.8
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +3
Query: 15 DLEGNVCLNILRED----WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 182
D G +CL+ L+ WKP L ++S++ + L EPNP+DPL E ++E + N+ F
Sbjct: 44 DSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQF 103
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +3
Query: 15 DLEGNVCLNILRED----WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 182
D G +CL+ L+ WKP L ++S++ + L EPNP+DPL E ++E + N+ F
Sbjct: 58 DSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQF 117
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 48.8 bits (111), Expect = 1e-06
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +3
Query: 24 GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 149
G +C+N L++DWKP L + ++ ++ L + PNPE LN+EA
Sbjct: 160 GEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEA 201
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 48.4 bits (110), Expect = 1e-06
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 30 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHVQRA 203
VC+++L +DW+ + +V GL +LF PN EDPL+ E E + FE++V+ +
Sbjct: 88 VCMSLL-DDWQASNDLEDLVQGLLFLFYNPNLEDPLSSLFEEESEEEYEYGSFEENVRAS 146
Query: 204 MRGGYVGTSYFERCLK*NLHTCKK 275
+ G V F+R L N T K
Sbjct: 147 LEGKTVAGENFQRVLFENEDTQSK 170
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 46.8 bits (106), Expect = 4e-06
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 21 EGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHV 194
+G+VCL++L +DW + +V GL +LF PN EDPL+ + D+ + FE++V
Sbjct: 86 DGSVCLSLL-DDWNESNDLEDLVQGLLFLFYNPNLEDPLSPLFDLTDDYEYGS--FEENV 142
Query: 195 QRAMRGGYVGTSYFERCL 248
+ ++ G V F R L
Sbjct: 143 RASLEGKTVEGITFPRAL 160
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 15 DLEGNVCLNILR-EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQH 191
D +G VCL I+ E+WKP ++ L L +P PE PL + A+E +++ F ++
Sbjct: 71 DEKGQVCLPIISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMKN 130
Query: 192 VQ 197
+
Sbjct: 131 AE 132
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 21 EGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 173
+G VCL+IL++ W P LT++ ++ + L + NP DPL A NR
Sbjct: 160 KGMVCLDILKDSWSPALTISKVLLSICSLLTDCNPADPLVGSIAALYVQNR 210
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 37.9 bits (84), Expect = 0.002
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 57 WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 170
W P L + +++ +Q L PNP+DPL + A++ + N
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVN 40
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 51 EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 152
E W+P+ TV +I+ + + EPN E P N +AA
Sbjct: 436 ERWRPIHTVETIMLSVISMLAEPNDESPANVDAA 469
>SB_10913| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.3)
Length = 217
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I ND E CT
Sbjct: 122 NDHHTEVCTTTPSYHIIDNDHHTEVCT 148
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 199 ELCEAATSAHLISNDASNETCT 264
E+C S H+I ND E CT
Sbjct: 73 EVCTTTLSYHIIDNDHHTEVCT 94
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 199 ELCEAATSAHLISNDASNETCT 264
E+C S H+I ND E CT
Sbjct: 109 EVCTTTLSYHIIDNDHHTEVCT 130
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I D E CT
Sbjct: 50 NDHHTEVCTTTLSYHIIDTDHHTEVCT 76
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I D E CT
Sbjct: 86 NDHHTEVCTTTLSYHIIDTDHHTEVCT 112
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I D E CT
Sbjct: 140 NDHHTEVCTTTLSYHIIDTDHHTEVCT 166
>SB_51158| Best HMM Match : VWD (HMM E-Value=0.058)
Length = 496
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I ND E CT
Sbjct: 293 NDHHTEVCTTTLSYHIIDNDHHTEVCT 319
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I ND E CT
Sbjct: 311 NDHHTEVCTTTLSYHIIDNDHHTEVCT 337
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I ND E CT
Sbjct: 329 NDHHTEVCTTTLSYHIIDNDHHTEVCT 355
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 199 ELCEAATSAHLISNDASNETCT 264
E+C S H+I ND E CT
Sbjct: 244 EVCTTTLSYHIIDNDHHTEVCT 265
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 199 ELCEAATSAHLISNDASNETCT 264
E+C S H+I ND E CT
Sbjct: 280 EVCTTTLSYHIIDNDHHTEVCT 301
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I D E CT
Sbjct: 257 NDHHTEVCTTTLSYHIIDTDHHTEVCT 283
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 184 NNTFRELCEAATSAHLISNDASNETCT 264
N+ E+C S H+I D E CT
Sbjct: 347 NDHHTEVCTTTLSYHIIDTDHHTEVCT 373
>SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 100 SIYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRELC 207
S+YS Q L PSTRK++ S GD + +LC
Sbjct: 113 SLYSNTQYLP-PSTRKRILGSPIAGDLNRKHKLQLC 147
>SB_19955| Best HMM Match : AFP (HMM E-Value=0.14)
Length = 691
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 142 RKQL-TSSKATGDFSNNTFRELCE 210
RKQL TS K TGD ++ R++CE
Sbjct: 38 RKQLQTSKKKTGDDLSDIIRDICE 61
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 100 SIYSWNQTLKIPSTRKQLTSSKATGDFSNN 189
SI S + TL P T + +S TGD SNN
Sbjct: 51 SIESTSTTLSSPDTTGEGSSDNMTGDNSNN 80
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 51 EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 152
E W P V +I+ + L EPN P N +A+
Sbjct: 1228 ERWNPTQNVRTILLSVISLLNEPNTFSPANVDAS 1261
>SB_24495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +1
Query: 88 CTVSSIYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDA 246
C + S+Y N +T + + T + ++ ++ CEAA S+ + A
Sbjct: 163 CFLCSLYRGNMETSTMTTEQLVDMLTITDRYEVDSLKQACEAALSSRMTEETA 215
>SB_12549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 171 CCFGARQLLPC*GDLQGLVPRINTGDRTLWS 79
C FGA LL GD + R+ D WS
Sbjct: 292 CLFGAYDLLSVFGDQSAVACRVIASDSVRWS 322
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 81 SIVYGLQYLFLEPNPEDPLNKEAADELQ 164
SIV+G+Q + NP+DPL A D +Q
Sbjct: 205 SIVFGIQS-DCQMNPDDPLMARALDAMQ 231
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 25.8 bits (54), Expect = 8.8
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Frame = +3
Query: 15 DLEGNVCL---NILR----EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 173
D+EGN CL NI R W+ + L L N ++ + E +
Sbjct: 28 DIEGNKCLQCGNICRGFSVHPWRKFCNSCKCPHELHVLSTNNNDQNTPEERMGVEEEDPP 87
Query: 174 RLFEQHVQRAMRGGY 218
L H+Q+AM GY
Sbjct: 88 MLQGSHLQQAMMEGY 102
>SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20)
Length = 984
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 108 FLEPNPEDPLNKEAADELQSNRRLFEQ 188
FL N EDP + DEL+ N + +Q
Sbjct: 449 FLAANKEDPDERPTFDELRDNMQALQQ 475
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,573,347
Number of Sequences: 59808
Number of extensions: 174610
Number of successful extensions: 499
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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