Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0443
         (332 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    23   4.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   5.3  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   5.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    21   9.3  

>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 239 FEIRCADVAASHSSLNVLFEKSPV 168
           ++ +C D   SHS  N++  + P+
Sbjct: 20  YQYQCTDGVVSHSGANIIDIRHPL 43


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 48  REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADEL 161
           R D   VL  ++    + Y+F +  PE+ +  EA D L
Sbjct: 258 RVDKTAVLRFSAHGLRVDYVFGKSKPEETVKPEAQDSL 295


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 87  VYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 200
           VYG + L + P P  P      DEL +      QHV R
Sbjct: 436 VYGEEALRVTPPPIAPYLNGGNDELDNGDAGELQHVTR 473


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 130 IPSTRKQLTSSKATGDFSNNTFRELCEAAT 219
           + +  K+L   KA     N+T R LC   T
Sbjct: 764 LANVEKKLAEVKAKSSDKNSTARALCANKT 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,203
Number of Sequences: 2352
Number of extensions: 6566
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)