Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0440
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   5.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   5.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   9.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 107 NAAARWLLIGARTHHAI 57
           NA    +L+GA T+HAI
Sbjct: 57  NALLVLILLGALTYHAI 73


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 107 NAAARWLLIGARTHHAI 57
           NA    +L+GA T+HAI
Sbjct: 57  NALLVLILLGALTYHAI 73


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 67  CVRAPIRSQRAAALSQVTPGCCAGSPP 147
           C R  +++ RA+      P   + SPP
Sbjct: 255 CTRTTLKNNRASPYPMQRPKSASLSPP 281


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 181 YCIFIYLLVVCFV 219
           +C FIYL  V ++
Sbjct: 147 FCYFIYLFTVYYI 159


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 148 QSLVLIARFSHYCIFIYLLVVCFVS 222
           +S   +++   +C F+  LV C V+
Sbjct: 32  ESYFRLSKAKSFCTFVAALVYCSVT 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,655
Number of Sequences: 336
Number of extensions: 1737
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)