Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0440
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    29   0.076
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.6  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 0.076
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 379 NLQDFIEKKKKSVCVRSDARLEFTGYKKLNETIREIV 269
           N  D IEK  K     SDA+LE T   + N+ +  I+
Sbjct: 238 NTTDSIEKSAKPTTNTSDAQLELTSSSESNDLVTSII 274


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = -3

Query: 424  RYEIISHATSFNL*FNLQDFIEKKKKSVCVRSDARLEFTGYKKLNETIREIVLYYDKRYT 245
            R EI+   TS  +   L+  + ++     V+SDA  + T +      I E    YD    
Sbjct: 1631 RGEILIFITSLRVSVWLEGVVVQETLLEDVKSDAERKLTLHLSRTAEITEFFEMYDSTLK 1690

Query: 244  TDY*QIN 224
              Y Q++
Sbjct: 1691 VTYQQLS 1697


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,201
Number of Sequences: 2352
Number of extensions: 6741
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)