Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0436
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   1.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   2.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   7.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +3

Query: 102 SRIPQTQ-QANKPYGGHIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDLN 260
           + I +TQ Q  KP  G  A        +++ +RE       S  R I +  +LN
Sbjct: 73  TEIQETQPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLN 126


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +3

Query: 102 SRIPQTQ-QANKPYGGHIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDLN 260
           + I +TQ Q  KP  G  A        +++ +RE       S  R I +  +LN
Sbjct: 64  TEIQETQPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLN 117


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 270 IPICSDHEAIRYFSLMNLLS--VVRFLFVFG 184
           I I +DH+A+++ S   LLS  + R+  + G
Sbjct: 668 IIIRTDHQALKFLSRCRLLSERLTRWTLILG 698


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 255 DHEAIRYFSLMNLLSVVRFLFV 190
           DH A+++FS+   L     LFV
Sbjct: 311 DHLAVKHFSVEGQLEFRALLFV 332


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2

Query: 120 VFEVFLTGSDLQIRYHRRRHFRIGCSDL*NIY 25
           + +++ TGSD Q+R      +R+  S+   +Y
Sbjct: 442 IIQIWTTGSDPQVRNLLDNGYRVILSNYDALY 473


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 445 FRWCLITFSGNIILQTI 395
           F W LI   G I+LQ +
Sbjct: 174 FGWSLIFLFGRIVLQLL 190


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 323 CLCSVAVHVVGKALRPLQY 267
           CLC  +VH     + PL +
Sbjct: 212 CLCGASVHSESSKVLPLLF 230


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 421 SGNIILQTIKYRL 383
           S N++L TI YRL
Sbjct: 102 SENVVLVTINYRL 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,007
Number of Sequences: 336
Number of extensions: 2236
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)