Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0436
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical pr... 63 9e-11
AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical ... 40 7e-04
Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical pr... 35 0.027
AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical ... 34 0.048
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 30 0.77
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 30 0.77
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 30 0.77
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 29 1.8
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 4.1
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 4.1
U58749-6|AAU05599.2| 276|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 5.5
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL161711-4|CAC44301.2| 301|Caenorhabditis elegans Hypothetical ... 27 5.5
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 5.5
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical... 27 9.5
>L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical
protein K02D10.5 protein.
Length = 277
Score = 63.3 bits (147), Expect = 9e-11
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2
Query: 254 SEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQ 433
SE+IG +TA++L QRE+L+NT++ LDEI+ +Q++LN +KS F G+ K Q
Sbjct: 64 SEKIGTSTAQQLLEQREKLENTEKNLDEIHRTTQMTQRNLNSLKSFFGGMFKNKFTKKPQ 123
Query: 434 TPSKSPATXNVRNAGTSS 487
P+++P ++A S
Sbjct: 124 EPTETPTVPQSKSASRLS 141
>AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical
protein Y22F5A.3a protein.
Length = 207
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 188 NTKRNRTTDNRFINEKYRIA--S*SEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYS 361
N K N TTD+ + + +A S++ GI T L Q EQL+ + LD IN ++ +
Sbjct: 15 NLKMNATTDDSLESTRRMLALCEESKEAGIKTLVMLDDQGEQLERCEGALDTINQDMKEA 74
Query: 362 QKHLNGIK 385
+ HL G++
Sbjct: 75 EDHLKGME 82
>Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical
protein Y57G11C.4 protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.027
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 188 NTKR-NRTTDNRFINEKYRIAS*SEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQ 364
NT+R R+T R + + +RIA +EQIG L+ QRE + + RL + N +L +
Sbjct: 131 NTQRLERST--RKVQDAHRIAVETEQIGAEMLSNLASQRETIGRSRDRLRQSNADLGRAN 188
Query: 365 KHLNGI 382
K L+ +
Sbjct: 189 KTLSSM 194
>AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical
protein Y22F5A.3b protein.
Length = 234
Score = 34.3 bits (75), Expect = 0.048
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 254 SEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIK 385
S++ GI T L Q EQL+ + LD IN ++ ++ HL G++
Sbjct: 66 SKEAGIKTLVMLDDQGEQLERCEGALDTINQDMKEAEDHLKGME 109
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 30.3 bits (65), Expect = 0.77
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 263 IGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPS 442
IG + +LSR + DR +++N N+N + N +KS G++ Y+ G+S T
Sbjct: 151 IGSNSRRDLSRSHSEHGGPDRGSNKVNKNIN---RFSNFVKS---GVEAYVIGESKTTSQ 204
Query: 443 KSPATXNVRNAG 478
S V N G
Sbjct: 205 ISERHEVVMNNG 216
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 30.3 bits (65), Expect = 0.77
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 263 IGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPS 442
IG + +LSR + DR +++N N+N + N +KS G++ Y+ G+S T
Sbjct: 151 IGSNSRRDLSRSHSEHGGPDRGSNKVNKNIN---RFSNFVKS---GVEAYVIGESKTTSQ 204
Query: 443 KSPATXNVRNAG 478
S V N G
Sbjct: 205 ISERHEVVMNNG 216
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 30.3 bits (65), Expect = 0.77
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 263 IGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPS 442
IG + +LSR + DR +++N N+N + N +KS G++ Y+ G+S T
Sbjct: 177 IGSNSRRDLSRSHSEHGGPDRGSNKVNKNIN---RFSNFVKS---GVEAYVIGESKTTSQ 230
Query: 443 KSPATXNVRNAG 478
S V N G
Sbjct: 231 ISERHEVVMNNG 242
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical protein
F54B11.3a protein.
Length = 1111
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 281 EELSRQREQLQNTD-RRLDEINTNLNYSQKHLNG-IKSVFYGLKNYISGKSD 430
+ELS + EQ NT +L NTN+ Y + HL I+ + Y +GK D
Sbjct: 887 QELSAKFEQNYNTIIEQLKMENTNIQYDKNHLEAIIRQMIYEYDTDKTGKVD 938
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 281 EELSRQREQLQNTD-RRLDEINTNLNYSQKHLNG-IKSVFYGLKNYISGKSD 430
+ELS + EQ NT +L NTN+ Y + HL I+ + Y +GK D
Sbjct: 887 QELSAKFEQNYNTIIEQLKMENTNIQYDKNHLEAIIRQMIYEYDTDKTGKVD 938
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 302 EQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSK 445
E +++ + LDE+ L + HL+ +K+ + IS ++ T K
Sbjct: 608 EMIEHANEALDELARRLQHETSHLSNLKAARQDMTTAISTRTGPTKQK 655
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 323 RRLDEINTNLNYSQKHLNGIKSVFYGLKNYIS 418
+ D++N N+ H+ G+ + +KNYIS
Sbjct: 45 KNYDKLNVRTNHYTPHVEGVSPLKRDIKNYIS 76
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 174 QAMIQTQREIEQRTIDSSTRSIGLLRDLNKL-VLQRPKSFPDNVNSYRTQT 323
+A + Q+E+ + +D + + ++ DLN+L VL R K ++ YR T
Sbjct: 737 RAPVILQKELLKFDVDCNRTIVSMVADLNELRVLARSKHVERGMHMYRVST 787
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 174 QAMIQTQREIEQRTIDSSTRSIGLLRDLNKL-VLQRPKSFPDNVNSYRTQT 323
+A + Q+E+ + +D + + ++ DLN+L VL R K ++ YR T
Sbjct: 737 RAPVILQKELLKFDVDCNRTIVSMVADLNELRVLARSKHVERGMHMYRVST 787
>U58749-6|AAU05599.2| 276|Caenorhabditis elegans Hypothetical
protein B0496.3c protein.
Length = 276
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPA 454
T E+ + R L+N ++ +I + S + NG++SVF L+ ++S + +P + A
Sbjct: 72 TLEKDGQPRSILKN--KQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVA 129
Query: 455 T 457
+
Sbjct: 130 S 130
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPA 454
T E+ + R L+N ++ +I + S + NG++SVF L+ ++S + +P + A
Sbjct: 1347 TLEKDGQPRSILKN--KQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVA 1404
Query: 455 T 457
+
Sbjct: 1405 S 1405
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPA 454
T E+ + R L+N ++ +I + S + NG++SVF L+ ++S + +P + A
Sbjct: 1388 TLEKDGQPRSILKN--KQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVA 1445
Query: 455 T 457
+
Sbjct: 1446 S 1446
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 95 LPVKNTSNTASK*ALWRSYCRTGTSTPSYDPNTKRNRTTDNRFINEKYRIAS*SEQIGIA 274
+PV + N S A T+T + D T+ N DN + E +I E I +
Sbjct: 1308 IPVSSDQNAQSSNAQQTGLIENQTTTTNSDSLTRPNTLADNSHLGESQQIPV-IESIQSS 1366
Query: 275 TAEEL 289
T+E L
Sbjct: 1367 TSEAL 1371
>AL161711-4|CAC44301.2| 301|Caenorhabditis elegans Hypothetical
protein Y10G11A.1 protein.
Length = 301
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 326 RLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQ 433
+LDE+ L+ Q H+ IKS+ L+N +SG +DQ
Sbjct: 6 KLDEL---LSLPQVHVKDIKSLTDKLQNIVSGGADQ 38
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +2
Query: 116 NTASK*ALWRSYCRTGTSTPSYDPNTKRNRTTDNRFINEKYRIAS*SEQIGIATAEELSR 295
N A+ AL + TGTSTPS +K ++ A+ ++ +A A++ +
Sbjct: 2445 NPAALAALTGTSSSTGTSTPSAPKKSKPAPQKESTSSATAAAAAASAQAAALAAAQQQQQ 2504
Query: 296 QREQLQNTDRRLDEINT 346
Q +Q Q ++ T
Sbjct: 2505 QAQQAQQAAQQAQSAKT 2521
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 296 QREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSP 451
++ N +L E+N N NYS ++ + I +F + S T +K+P
Sbjct: 224 EKNGTNNQQHKLIEVNVNRNYSPRNNSQINELFKESGADRATSSKNTSNKTP 275
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 296 QREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSP 451
++ N +L E+N N NYS ++ + I +F + S T +K+P
Sbjct: 224 EKNGTNNQQHKLIEVNVNRNYSPRNNSQINELFKESGADRATSSKNTSNKTP 275
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 425 FFRKYNSSDHKIQTLYHLNVFDYS 354
FF YNSS H I + LNV DY+
Sbjct: 536 FFDNYNSSVHFIFDDFELNVGDYA 559
>Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical
protein R12H7.4 protein.
Length = 369
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 472 ITYIXGRWTFRWCLITFSGNI 410
+ Y G W WCLIT NI
Sbjct: 52 LMYFCGGWIIVWCLITILVNI 72
>AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical
protein T12B5.4 protein.
Length = 295
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 188 NTKRNRTTDNRFINEKYRI 244
N KR RT D+RF NEK +I
Sbjct: 187 NAKRFRTHDSRFQNEKLQI 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,585,147
Number of Sequences: 27780
Number of extensions: 203773
Number of successful extensions: 651
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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