Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0436
(487 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 4.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 9.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.2
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 159 LERQRQAMIQTQREIE-QRTIDSSTRSIGLLRDLNKLVLQRPKS 287
L R+R+ MIQ +RE E +R L R K + +R KS
Sbjct: 36 LRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKS 79
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 4.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 320 DRRLDEINTNLNYSQK 367
++ L+E+N NLNY K
Sbjct: 50 EQTLNELNFNLNYVNK 65
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 257 EQIGIATAEELSRQREQLQNTDRR 328
++ GI EE+ R RE +N D R
Sbjct: 481 DRSGIDINEEIQRNREFYKNADVR 504
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 111 PQTQQANKP 137
PQ+Q+ANKP
Sbjct: 1016 PQSQEANKP 1024
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.2
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNY 412
T+ E SR R++ + + + + NY + N + Y NY
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.2
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNY 412
T+ E SR R++ + + + + NY + N + Y NY
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.2
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNY 412
T+ E SR R++ + + + + NY + N + Y NY
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.2
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 275 TAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNY 412
T+ E SR R++ + + + + NY + N + Y NY
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 20.6 bits (41), Expect = 9.2
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 108 IPQTQQANKPY 140
+P TQ+ NKP+
Sbjct: 86 VPTTQEINKPF 96
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 9.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 137 LWRSYCRTGTSTPSYDPNTK 196
LW+ R G TP D TK
Sbjct: 444 LWQRAHRLGIDTPKKDGPTK 463
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,786
Number of Sequences: 438
Number of extensions: 2792
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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