Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0435
(488 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 48 6e-07
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 48 8e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 48 1e-06
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 47 2e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 45 5e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 42 4e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 41 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 40 2e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 40 2e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 39 5e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 38 8e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 34 0.010
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 31 0.071
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 0.28
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.50
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 28 0.66
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 1.1
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 27 1.5
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 27 2.0
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 26 3.5
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 4.6
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 25 4.6
SPAC1782.10c |nhp2||RNA-binding protein Nhp2 |Schizosaccharomyce... 25 4.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 6.1
SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces pomb... 25 6.1
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 8.1
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.1
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 48.4 bits (110), Expect = 6e-07
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 28 YICQY--CNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
+ C Y C K+F K+ L+ HER H K +SC FC+ F N+H+++ H
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 48.0 bits (109), Expect = 8e-07
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +1
Query: 13 ADSMPYICQY--CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMK 174
++ P++C Y C+KAF K LK H+R HT KP+SC + C +F + +H++
Sbjct: 48 SNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE 105
Score = 35.1 bits (77), Expect = 0.006
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = +1
Query: 22 MPYICQY--CNKAFRFKQILKNH-ERQHTGSKPYSCQFCSME----FTNWSNYNKHMKRR 180
+PY C Y C F KQ L+NH R H YSC S F WS H++
Sbjct: 142 LPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREA 201
Query: 181 H 183
H
Sbjct: 202 H 202
Score = 33.1 bits (72), Expect = 0.023
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 34 CQY--CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMKRRH 183
C Y C K + +L+ H R H+ +P+ C + CS F S+ H KR H
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCH 77
Score = 29.5 bits (63), Expect = 0.28
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 43 CNKAFRFKQILKNHERQ-HTGSKPYSCQFCSMEFTNWSNYNKHMKRRH-GTDTAKKKITP 216
C K+F LK H H G+ + C C +F Y KHM +RH T KK P
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKF----GY-KHMLQRHLERGTCKKAHKP 297
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 28 YICQY--CNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
Y C + C K+F K+ + H R HT SK + C CS FT N+H+ ++H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 25.0 bits (52), Expect = 6.1
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +1
Query: 7 ARADSMPYICQYCNKAFRFKQILKNHERQ 93
+ +S +IC +C+ +F +L H Q
Sbjct: 40 SHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 46.8 bits (106), Expect = 2e-06
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHG 186
P+ C C K+F + + HE+ HTG K ++C C+ F N+H K G
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
Score = 42.3 bits (95), Expect = 4e-05
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 28 YICQY--CNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
Y+C + CNK F LK+H HT +P+ C C F +H KRRH
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFA-----RQHDKRRH 618
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 45.2 bits (102), Expect = 5e-06
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMKRRHGTDTAK 201
Y C +C + F ++ H R HTG KP+ C + C FT +H++ T K
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR----THLRK 59
Query: 202 KKITPEGVFPVD 237
+TPE V+
Sbjct: 60 ALVTPEQTLDVN 71
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.3 bits (95), Expect = 4e-05
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMK 174
PY C C KAF + H R HTG KP+ C F C+ F+ +H +
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.7 bits (91), Expect = 1e-04
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 NSARADSMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMK 174
+++ A ++ Y C C + F LK H HTG +P+ C + C F SN +H +
Sbjct: 459 STSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH-Q 517
Query: 175 RRHG 186
R HG
Sbjct: 518 RIHG 521
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 40.3 bits (90), Expect = 2e-04
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSC 120
Y+C+ C +AF + LK H R HT KP++C
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 39.9 bits (89), Expect = 2e-04
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 28 YICQY--CNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
Y+C Y CNK K +++H + H +PY C C F + +H++
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
Score = 39.5 bits (88), Expect = 3e-04
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKR 177
PY C C F LK H R H +PY C+ C F N+H +R
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQR 521
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 38.7 bits (86), Expect = 5e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQ-HTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
++C C+K F+ + L+ H R HT KP+ C C F+ N +H +R H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH-ERLH 473
Score = 30.3 bits (65), Expect = 0.16
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 4 SARADSMPYICQYCNKAFRFKQILKNHERQHTGSKP-YSCQF 126
S P++C C K F + L+ HER H + P +C F
Sbjct: 444 SLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACFF 484
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 37.9 bits (84), Expect = 8e-04
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 82 HERQHTGSKPYSCQF--CSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGVFPVDP 240
H R HTG KP+ C C FT KHM+ H DT + P+ P
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHPMHP 150
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 34.3 bits (75), Expect = 0.010
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
C C K F + L H+ H+ ++P C +C ++ +H++R H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 31.5 bits (68), Expect = 0.071
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQHTGSK 108
+S P +C CNK FR + L+NHE K
Sbjct: 266 NSNPIMCMVCNKNFRSQNQLENHENSKKHKK 296
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.5 bits (63), Expect = 0.28
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 109 PYSCQFCSMEFTNWSNYNKHMKRRH 183
P C FC+ F+++ KHMK H
Sbjct: 207 PRDCLFCAASFSSFDTCKKHMKASH 231
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 76 KNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKK 204
+N E Q +C+ C+ +F + Y+ HM + D K
Sbjct: 58 QNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSK 100
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 28.7 bits (61), Expect = 0.50
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSME 138
DS Y+C +CNK F +L + T ++C C E
Sbjct: 132 DSKGYVCPFCNKKFSSLDVLSLVTNEGT----FACNVCGTE 168
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 28.3 bits (60), Expect = 0.66
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 350 VNLFDSFLFPPFPGYHDLTLPLLSTGWVFYLYICP 246
+NLF F F +HD++ L + GW+ L+I P
Sbjct: 455 LNLFIIFTFVAL--WHDISWELFAWGWLIVLFILP 487
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 1.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTNWSNYNKHMKRRH 183
+KPY C+ CS + N + H H
Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYHRTHSH 422
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 314 PGYHDLTLPLLSTGWVFYLYICPVMGSTGKTPSGVI 207
P D + LL++ ++Y+ MGSTG + +GVI
Sbjct: 157 PSTTDRRMELLASVADSFIYVVSRMGSTGSSATGVI 192
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.6 bits (56), Expect = 2.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 172 KRRHGTDTAKKKITPEGVFPVDPITGQM 255
K +G + I P+G PV P+ GQ+
Sbjct: 10 KGSYGASSGNSNIPPQGFQPVYPVAGQL 37
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.8 bits (54), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 291 KSKIMIPGKRGKKKRVKQID*NK--FSYVEIIDKVMVSKEXPY 413
KS G+ K+ K K ++Y+E+ DKV+V+KE Y
Sbjct: 165 KSFSTTAGRANLKRNNKDAPLGKKTYAYIELSDKVIVTKERLY 207
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.4 bits (53), Expect = 4.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 307 YPGNGGKRKESNKLTEINLVMLR*LIKLWFQKKXHI 414
Y GN +++ES +L ++ + R LIK + Q H+
Sbjct: 615 YSGNSRQKEESAQLLKLLVSKARTLIKPYIQSIIHV 650
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 88 RQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
R+ ++P C+M+ TNW N H++
Sbjct: 453 RELDENQPCQSPMCTMKDTNWIRRNMHLQ 481
>SPAC1782.10c |nhp2||RNA-binding protein Nhp2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 154
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 300 IMIPGKRGKKKRVKQID*NKFSYVEIIDKV 389
+++PG GKKK + +++ K SY EII +V
Sbjct: 122 MIVPG--GKKKDMSKVEEYKESYEEIIKEV 149
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 335 SFLFPPFPGYHDLTLPLLST 276
SF FPPFP Y D ++T
Sbjct: 286 SFSFPPFPRYSDRMKRFIAT 305
>SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 25.0 bits (52), Expect = 6.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 322 PRFPGIMILLFHSSVPAGSSTCTSVQ*WGQQEKRPLE 212
PRFP + + +S V A +S+ Q WG++ P+E
Sbjct: 11 PRFPLVSLAHRNSKVFALASSNAVAQRWGKRFYAPIE 47
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 8.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 160 NKHMKRRHGTDTAKKKITPEG 222
N H++R +GTD +++P G
Sbjct: 336 NPHIERTYGTDINHARLSPRG 356
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 24.6 bits (51), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 397 ETITLSIIST*LNLFQSICLTLFFFP 320
+ +TL +I+ N+F S+ L ++ FP
Sbjct: 1632 DVLTLQLIAMFKNIFNSVGLDVYLFP 1657
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,025,900
Number of Sequences: 5004
Number of extensions: 42606
Number of successful extensions: 154
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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