Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0435
(488 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 50 3e-08
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.20
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 0.60
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.4
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 25 1.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 5.6
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 23 7.4
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 7.4
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 7.4
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 22 9.8
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 22 9.8
AF458073-1|AAL68639.1| 166|Anopheles gambiae D7-related 5 prote... 22 9.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 50.4 bits (115), Expect = 3e-08
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 13 ADSMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
++ P+ C C + F+ L+NH HTG+KP+ C+ C FT +H++ RH
Sbjct: 150 SEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRH 206
Score = 45.6 bits (103), Expect = 9e-07
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKH 168
P+ C +C A K L H R HTG KPYSC C FT ++ H
Sbjct: 239 PFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286
Score = 42.7 bits (96), Expect = 6e-06
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTD 192
Y C+YC A + L++H HT KPY C C+ F +HM H D
Sbjct: 355 YRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPD 409
Score = 40.3 bits (90), Expect = 3e-05
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGT 189
Y+C YCN +L H + H+ +P+ C C F ++ H+ GT
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGT 180
Score = 39.5 bits (88), Expect = 6e-05
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHG 186
P+ C C+ A LK H R HTG KP+ C C+ + +HM+ G
Sbjct: 211 PHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTG 264
Score = 37.5 bits (83), Expect = 2e-04
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQHTG---------SKPYSCQFCSMEFTNWSNYNKH 168
D PY C C + FR KQ+LK H + +K + C C F + N +H
Sbjct: 379 DQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRH 438
Query: 169 MKRRHGTDTAKKKI 210
M T K++
Sbjct: 439 MAMHDPESTVSKEM 452
Score = 35.5 bits (78), Expect = 0.001
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHM 171
P C+ C+ F + K H + H G K Y C++C + + H+
Sbjct: 326 PIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHL 374
Score = 33.1 bits (72), Expect = 0.005
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNH-ERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHG 186
C+ C K L+ H + HT KP C+ C F + +Y H K G
Sbjct: 300 CKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEG 351
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 27.9 bits (59), Expect = 0.20
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
C+ C K ++NH H + + C C +T N H K +H
Sbjct: 502 CKLCGKVVTH---IRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCKFKH 547
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.2 bits (55), Expect = 0.60
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
Y C C+K + +H H + + C C +FT N H K +H
Sbjct: 899 YSCVSCHKTVSNRW---HHANIHR-PQSHECPVCGQKFTRRDNMKAHCKVKH 946
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 25.0 bits (52), Expect = 1.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 212 VIFFLAVSVPCLLFICLL*F 153
++F LA+S+P L ICLL F
Sbjct: 1741 LLFALAMSLPALFNICLLLF 1760
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 109 PYSCQFCSMEFTNWSNYNKHMKRRH 183
PY Q C M+F +W+ ++ RH
Sbjct: 162 PYDEQTCLMKFGSWTYNGAQVELRH 186
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +1
Query: 31 ICQYCNKAFRFKQILKNHERQHTGSKPYSCQFC 129
ICQ+ Q K + G PY C+ C
Sbjct: 744 ICQHNTAGDTCDQCAKGYYGNALGGTPYDCKRC 776
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +1
Query: 109 PYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGV 225
PY Q C ++ +W+ + RH + + I GV
Sbjct: 160 PYDVQTCVLKLGSWTYDGFKVDLRHMDEKSGSNIVDVGV 198
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 109 PYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGV 225
P+ Q C M+F +W+ + RH + + + GV
Sbjct: 156 PFDEQTCVMKFGSWTYDGFQVDLRHIDEMNETNVVEVGV 194
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTNWSNYNKHMKRR-HGTDTAKKKITP 216
SKP +C FC + + + R G KKKI P
Sbjct: 71 SKPGACFFCGQPGHKKRDCKEFLNRESSGEGEKKKKIKP 109
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 347 NLFDSFLFPPFPGYHDLTLPL 285
NL S LFPP G+H + L
Sbjct: 1815 NLLLSNLFPPREGFHHKAVQL 1835
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 109 PYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGV 225
P+ Q C ++F +W+ + RH + + I GV
Sbjct: 160 PFDEQTCVLKFGSWTYDGFKVDLRHMDEKSGSNIVDVGV 198
>AF458073-1|AAL68639.1| 166|Anopheles gambiae D7-related 5 protein
protein.
Length = 166
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 102 ACVLPLVILQNLFKSKCFVTILTNVGH*VCSCR 4
A + PL+I++ L S C + + + VC R
Sbjct: 10 ALICPLIIVETLAVSDCVRHVSESARNTVCDVR 42
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,986
Number of Sequences: 2352
Number of extensions: 9780
Number of successful extensions: 76
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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