Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0435
(488 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 43 1e-04
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 30 0.003
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 29 0.003
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 38 0.004
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 38 0.004
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 0.005
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 37 0.006
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 0.008
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 0.014
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 35 0.034
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 26 0.12
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 26 0.15
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 32 0.18
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.24
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 31 0.32
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 31 0.42
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 31 0.42
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.42
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 30 0.73
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 30 0.73
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 30 0.96
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 30 0.96
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 30 0.96
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 29 1.3
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 29 1.3
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 29 1.7
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 29 1.7
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 1.7
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 29 1.7
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 1.7
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 29 1.7
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 29 1.7
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 29 1.7
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 29 1.7
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 29 2.2
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 28 2.9
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 28 2.9
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 28 2.9
At1g31390.1 68414.m03843 meprin and TRAF homology domain-contain... 28 2.9
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 3.9
At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative (CH... 28 3.9
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 28 3.9
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 28 3.9
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 28 3.9
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 27 5.1
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 27 5.1
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 27 6.8
At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to l... 27 6.8
At3g58040.1 68416.m06470 seven in absentia (SINA) family protein... 27 6.8
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 27 9.0
At5g25420.1 68418.m03016 xanthine/uracil permease family protein... 27 9.0
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 27 9.0
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 27 9.0
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 27 9.0
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 27 9.0
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 27 9.0
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 16 DSMPYICQY--CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMKR 177
D P+ C + C+ F+++ H R HTG +PY C+ C + F S+Y++H ++
Sbjct: 1264 DERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRRK 1321
Score = 34.3 bits (75), Expect = 0.045
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 43 CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFT-NWSNYNKHMKRRHG 186
C K FR + L H+R H +P+ C + CSM F W+ +H++ G
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWAR-TEHLRLHTG 1294
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 30.3 bits (65), Expect(2) = 0.003
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
+IC+ CNK F+ +Q L+ H R H
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGH 103
Score = 27.1 bits (57), Expect(2) = 0.003
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K++ R+H G K + C CS + S++ H K
Sbjct: 144 IKKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSK 177
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 29.5 bits (63), Expect(2) = 0.003
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
+IC CNK F+ +Q L+ H R H
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGH 105
Score = 27.9 bits (59), Expect(2) = 0.003
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K++ R+H G K + C+ CS + S++ H K
Sbjct: 146 IKKHYYRKH-GEKKWKCEKCSKRYAVQSDWKAHSK 179
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 43 CNKAFRFKQILKNHERQHTGSKPYSC--QFCSMEFTNWSNYNKHMKRRHGTDTAKKKITP 216
C ++R K L H H G K + C + C EF+ N +H+K+ H D K T
Sbjct: 101 CAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTG 159
Query: 217 EGVFPVD-PITGQMYK*KTQPVLRSGRVRS*YPGNGGKRKESN 342
G D G K K+ SG GNGG K++N
Sbjct: 160 LGDGDKDNTCKGDDDKEKS----GSGGCEKENEGNGGSGKDNN 198
Score = 31.9 bits (69), Expect = 0.24
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 19 SMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMKRRHG 186
S + CQ C F+ LK H + H+ + ++C C+ + + N+H+ G
Sbjct: 63 SSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG 120
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQHT-GSKP--YSCQF--CSMEFTNWSNYNKHMKRRH 183
C+ C K+ +K H R H S P C+ CS F+ SN KHMK H
Sbjct: 277 CEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH 330
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 18/75 (24%)
Frame = +1
Query: 4 SARADSMPYICQYCNKAFRFKQILKNHERQH------------------TGSKPYSCQFC 129
SA+ D Y+CQYC + ++ H + H S ++CQ C
Sbjct: 12 SAKKDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQEC 71
Query: 130 SMEFTNWSNYNKHMK 174
EF ++ +HM+
Sbjct: 72 GAEFKKPAHLKQHMQ 86
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 43 CNKAFRFKQILKNHERQHTGSKPYSC--QFCSMEFTNWSNYNKHMKRRHGTDTAKKKITP 216
C ++R K L H H G K + C + C EF+ N +H+K+ H D K T
Sbjct: 13 CAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTG 71
Query: 217 EGVFPVD-PITGQMYK*KTQPVLRSGRVRS*YPGNGGKRKESN 342
G D G K K+ SG GNGG K++N
Sbjct: 72 LGDGDKDNTCKGDDDKEKS----GSGGCEKENEGNGGSGKDNN 110
Score = 30.7 bits (66), Expect = 0.55
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQHT-GSKP--YSCQF--CSMEFTNWSNYNKHMKRRH 183
C+ C K+ +K H R H S P C+ CS F+ SN KHMK H
Sbjct: 189 CEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH 242
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 29.5 bits (63), Expect(2) = 0.005
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ +Q L+ H R H
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGH 104
Score = 27.1 bits (57), Expect(2) = 0.005
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K++ R+H G K + C CS + S++ H K
Sbjct: 145 IKKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSK 178
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 13 ADSMPYICQY--CNKAFRFKQILKNHERQHTGSKPYSC--QFCSMEFTNWSNYNKHMKRR 180
+D P C + C F++ H R HTG++PY C C F S++++H KR+
Sbjct: 1285 SDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRH-KRK 1343
Query: 181 HGTDTAK 201
G K
Sbjct: 1344 TGHSVKK 1350
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 43 CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFT-NWSNYNKHMKRRHG 186
C K F + L H+R H+ +P C + C M F WS +H++ G
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSR-TEHIRVHTG 1316
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.1 bits (62), Expect(2) = 0.008
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ Q L+ H R H
Sbjct: 61 FVCEICNKGFQRDQNLQLHRRGH 83
Score = 26.6 bits (56), Expect(2) = 0.008
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 73 LKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
+K H + G K + C+ CS ++ S++ H K
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.1 bits (62), Expect(2) = 0.014
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ Q L+ H R H
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGH 85
Score = 25.8 bits (54), Expect(2) = 0.014
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 73 LKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
+K H + G K + C CS ++ S++ H K
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 34.7 bits (76), Expect = 0.034
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 28 YICQY--CNKAFRFKQILKNHERQHTGSKPYSCQF--CSMEFTNWSNYNKHMK 174
Y+C C K F LK H HTG + Y C + C F+ N HMK
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMK 160
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 26.2 bits (55), Expect(2) = 0.12
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ C K F+ Q L+ H R H
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGH 88
Score = 25.4 bits (53), Expect(2) = 0.12
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 73 LKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
+K H + G K ++C+ C+ + S++ H K
Sbjct: 129 IKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK 162
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 26.2 bits (55), Expect(2) = 0.15
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ C K F+ Q L+ H R H
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGH 92
Score = 25.0 bits (52), Expect(2) = 0.15
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 73 LKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
+K H + G K + C+ C+ + S++ H K
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSK 166
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 94 HTGSKPYSCQFCSMEFTNWSNYNKHM-----KRRHGTDTAKKKITPEGV 225
H G ++C CS F ++N HM + R G D+ K I P +
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAI 222
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 61 FKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
F+ + +++R+H GSKP+SC C ++ H K
Sbjct: 249 FRTLQTHYKRKH-GSKPFSCGKCGKALAVKGDWRTHEK 285
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.9 bits (69), Expect = 0.24
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 61 FKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
F+ + +++R+H GSKP++C+ C F ++ H K
Sbjct: 246 FRTLQTHYKRKH-GSKPFACRMCGKAFAVKGDWRTHEK 282
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 19 SMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
S P+ C+ C KAF K + HE+ K + C C +F + + H+K
Sbjct: 259 SKPFACRMCGKAFAVKGDWRTHEK--NCGKLWYCS-CGSDFKHKRSLKDHVK 307
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 31.5 bits (68), Expect = 0.32
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQH 96
+S YIC+ CN+ F+ Q L+ H R+H
Sbjct: 63 ESDRYICEICNQGFQRDQNLQMHRRRH 89
Score = 31.1 bits (67), Expect = 0.42
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K+ R+H+ K + C+ CS + S+Y H+K
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 31.1 bits (67), Expect = 0.42
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 RQHTGSKPYSCQFCSMEFTNWSNYNKHMK-RRHGTDTAKKKITPEGVFPVDP 240
R H GS Y C+ C N NY H + +RH T+ AK+ P P
Sbjct: 46 RNHLGS--YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKP 95
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 31.1 bits (67), Expect = 0.42
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQH 96
+S Y+C+ CN+ F+ Q L+ H R+H
Sbjct: 66 ESDRYVCEICNQGFQRDQNLQMHRRRH 92
Score = 31.1 bits (67), Expect = 0.42
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K+ R+H+ K + C+ CS + S+Y H+K
Sbjct: 134 IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK 168
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.1 bits (67), Expect = 0.42
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 16 DSMPYICQYCNKAFRFKQILKNHERQH 96
+S Y+C+ CN+ F+ Q L+ H R+H
Sbjct: 35 ESDRYVCEICNQGFQRDQNLQMHRRRH 61
Score = 29.9 bits (64), Expect = 0.96
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K+ R+H+ K + C+ CS + S+Y H+K
Sbjct: 104 IKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLK 138
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 30.3 bits (65), Expect = 0.73
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKIT 213
C YC++ F ++IL H++ +K + C C + + S H+ + H + K
Sbjct: 14 CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNA 69
Query: 214 PEG 222
+G
Sbjct: 70 KDG 72
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 30.3 bits (65), Expect = 0.73
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 85 ERQHTGSKPYSCQFCSMEFTNWSNYNKHMKR 177
E+Q K Y C+FCS++F HM R
Sbjct: 74 EKQTKDGKEYECRFCSLKFFKSQALGGHMNR 104
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNH-ERQHTGSKPYSCQFCSMEFTNWSNYNKHMKR 177
C+ C K FR+++ KNH H C+ M + + K KR
Sbjct: 66 CEECGKGFRYEKYFKNHRSMMHLSPNEKVCEESLMTLSRSLGFVKKKKR 114
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
+IC+ CNK F+ Q L+ H R H
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGH 90
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K+ R+H G K + C CS ++ S++ H K
Sbjct: 132 IKKHFSRKH-GEKKWKCDKCSKKYAVMSDWKAHSK 165
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
+IC+ CNK F+ Q L+ H+R H
Sbjct: 92 FICEVCNKGFQRDQNLQLHKRGH 114
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 73 LKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
+K H + G K + C+ CS ++ S++ H K
Sbjct: 156 IKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
P+ C+ C KAF K + HE+ K + C C +F + + H+K
Sbjct: 339 PFACRRCGKAFAVKGDWRTHEK--NCGKLWYCS-CGSDFKHKRSLKDHVK 385
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 19 SMPYICQYCNKAFRFKQILKNHERQHTGSKP 111
++PY C C KAF Q L H+ H P
Sbjct: 103 NLPYKCNVCEKAFPSYQALGGHKASHRIKPP 133
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
+ C+ CNK F+ +Q L+ H+R H
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGH 28
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ Q L+ H R H
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH 104
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 70 ILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
I K++ R+H G K + C+ CS ++ S++ H K
Sbjct: 146 IKKHYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAK 179
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ Q L+ H R H
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH 104
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 25 PYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMK 174
P++C+ C KAF + + HE+ K + C C +F + + H+K
Sbjct: 300 PFMCRKCGKAFAVRGDWRTHEK--NCGKLWYC-ICGSDFKHKRSLKDHIK 346
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 13 ADSMPYICQYCNKAFRFKQILKNHERQH 96
+ + PYIC++C + F Q L H H
Sbjct: 16 SQARPYICEFCERGFSNAQALGGHMNIH 43
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAK 201
++PY C+FC F+N HM H D AK
Sbjct: 18 ARPYICEFCERGFSNAQALGGHM-NIHRKDRAK 49
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C+ CNK F+ Q L+ H R H
Sbjct: 99 FVCEICNKGFQRDQNLQLHRRGH 121
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 106 KPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGVF 228
K Y+C FC EF + HM H D AK + P +F
Sbjct: 47 KNYTCSFCRREFRSAQALGGHM-NVHRRDRAKLRQIPSWLF 86
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ERQHTGSKPYSCQFCSMEFTNWSNYNKHMKR-RHGTDTAKKKITPEGVFPVDPIT 246
E + K Y C+FCS++F HM R R +T + V+ D IT
Sbjct: 42 EGKDESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT 96
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 13 ADSMPYICQYCNKAFRFKQILKNHERQH 96
++S Y CQYC + F Q L H+ H
Sbjct: 36 SESRKYECQYCCREFANSQALGGHQNAH 63
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTN----WSNYNKHMKRR 180
S+ Y CQ+C EF N + N H K R
Sbjct: 38 SRKYECQYCCREFANSQALGGHQNAHKKER 67
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITP 216
+K + C C EFT+ HM+R G I P
Sbjct: 226 NKVHECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAP 263
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 76 KNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKK 207
+ H +T PY+C C+ F + HM + +T K++
Sbjct: 231 RTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYNNETDKER 274
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSME 138
Y C +C K F Q L H+ H + + + ME
Sbjct: 80 YTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEME 116
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 61 FKQILKNHERQHTGSKPYSCQFCSMEFT---NWSNYNKHMKRR 180
F+ + +++R+H G KP+SC+ C +W + K+ +R
Sbjct: 213 FRTLQTHYKRKH-GHKPFSCRLCGKLLAVKGDWRTHEKNCGKR 254
>At1g31390.1 68414.m03843 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 268
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 316 NGGKRKESNKLTEINLVMLR*----LIKLWFQKKXHISEFQT 429
NG KR +LT +N + + +I+ WF K HIS FQT
Sbjct: 67 NGWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQT 108
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 13 ADSMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYN 162
+D Y C C K+F Q L H+ H S + E +N S+ N
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSN 141
>At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative
(CHX24) similar to Na+/H+-exchanging protein NapA -
Enterococcus hirae, PIR:A42111; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 859
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -1
Query: 359 FISVNLFDSFLFPPFPGYHDLTLPLLSTGWVFYLYICPV---MGSTGKTPSGVIFFLAVS 189
F + F+ +LFPP Y + L+ G+ ++L++ +G+ GK P + A+
Sbjct: 109 FGGIRNFNYYLFPPIANYICANIGLM--GFFYFLFLTAAKTDVGAIGKAPRKHKYIAAIG 166
Query: 188 V 186
V
Sbjct: 167 V 167
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 97 TGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTA 198
+ +K + C C EFT+ HM+R G A
Sbjct: 256 SNNKVHECGICGAEFTSGQALGGHMRRHRGAVVA 289
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +1
Query: 100 GSKPYSCQFCSMEFTN----WSNYNKHMKRRHGTDTAKKKIT 213
G + Y CQ+C EF N + N H K R A+ + T
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQAT 110
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
Y CQYC + F Q L H+ H
Sbjct: 73 YECQYCCREFGNSQALGGHQNAH 95
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 34 CQYCNKAFRFKQILKNHERQH 96
CQYC K F Q L H+ H
Sbjct: 62 CQYCGKEFANSQALGGHQNAH 82
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 97 TGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKK 207
T K + CQ+C EF N H + H + KKK
Sbjct: 55 TVMKRHECQYCGKEFANSQALGGH-QNAHKKERLKKK 90
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia]
Length = 1426
Score = 27.5 bits (58), Expect = 5.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 290 PLLSTGWVFYLYICPV 243
PL+ W+++ YICPV
Sbjct: 1338 PLIPVWWIWFYYICPV 1353
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
++C CNK+F Q L H+R H
Sbjct: 136 HVCTICNKSFPSGQALGGHKRCH 158
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 31 ICQYCNKAFRFKQILKNHERQHT 99
ICQ C K+F + L H R HT
Sbjct: 10 ICQVCKKSFSNGKALGGHMRAHT 32
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
Y CQ CN+ F Q L H++ H
Sbjct: 274 YECQICNRMFASGQALGGHKKIH 296
>At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to
lycopene epsilon cyclase [GI:1399181]
Length = 524
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 ITRGNTQAPSHIHV-SSVVWNSQTGQITISI*RGDMALIQPKRKSLQRAFFL 232
+ R ++AP + V + ++ T QI +I R + P + QRAFFL
Sbjct: 392 VVRSLSEAPKYASVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFL 443
>At3g58040.1 68416.m06470 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 308
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 13 ADSMPYICQY----CNKAFRFKQILKNHERQHTGSKPYSCQFCSME 138
A+S+ C+Y C+ F + LK HE QH +PY+C + E
Sbjct: 111 AESLEVPCRYQNLGCHDIFPYYSKLK-HE-QHCRFRPYTCPYAGSE 154
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = +1
Query: 76 KNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRH 183
+ H + H + C +C F + +KH RH
Sbjct: 93 QEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRH 128
>At5g25420.1 68418.m03016 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 419
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -1
Query: 341 FDSFLFPPFPGYHDLTLPLLSTGWVFYLYICPVMGSTGKTPSGVIFFLAVSVP 183
F S P + + L +S+ + +L C + K G FF+A+S+P
Sbjct: 335 FASIPLPIMASLYCIVLCFVSSAGLSFLQFCNLNSFNTKFILGFSFFMAISIP 387
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 106 KPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKK 207
+ YSC FC EF + HM H D A+ K
Sbjct: 53 RSYSCSFCGREFKSAQALGGHM-NVHRRDRARLK 85
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHTGSK 108
++C C+K+F Q L H+R H K
Sbjct: 148 HVCSICHKSFATGQALGGHKRCHYEGK 174
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQH 96
Y C C K+F Q L +H+R H
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLH 467
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 103 SKPYSCQFCSMEFTNWSNYNKHMKRRHGT 189
+K + C C EFT+ HM RRH T
Sbjct: 185 NKVHECSICGSEFTSGQALGGHM-RRHRT 212
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 28 YICQYCNKAFRFKQILKNHERQHT 99
++C+YC K F + L H R HT
Sbjct: 9 FLCKYCYKTFPSGKALGGHIRIHT 32
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,446,989
Number of Sequences: 28952
Number of extensions: 218301
Number of successful extensions: 705
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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