Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0428
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   1.3  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   3.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.2  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = -1

Query: 385 NSPSYKKQIMEFXRWKKPKYNDXXXXXXXXXXXXXLFGINQIVKTVNDKTFHTTLRSMFL 206
           N PSY  ++  +   +    N               FGIN I+  V+ + F   +  MF 
Sbjct: 386 NLPSYIVRVKIYLETEHTNMNIYLVQNCCQLFFMTNFGINFILYCVSGQNFRKAIFGMFQ 445

Query: 205 GH*QRQ 188
              QRQ
Sbjct: 446 KRSQRQ 451


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 277 FGINQIVKTVNDKTFHTTLRSMFLGH*QRQTFNEP 173
           FGIN I+  ++ + F   +  MF  H + +   EP
Sbjct: 370 FGINFILYCISGQNFRKAVIEMFRRHRKSRVNQEP 404


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 50   LSSSFEIC*HIPAEVHEKNSTSNVAIQFELTRQLLER*LASRFIECLTLLVTKKHRSKRC 229
            ++++ E C +     H      NV + +   RQLLER    R   C + +V  +   K  
Sbjct: 1579 VTAAKERCLYEAVLKHNHRLAHNVRM-WRTVRQLLERTRQKRMAVCPSSVVLAREAFKHP 1637

Query: 230  MKSF 241
             +SF
Sbjct: 1638 SESF 1641


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,174
Number of Sequences: 2352
Number of extensions: 7607
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)