Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0428
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041337-1|AAH41337.1|  611|Homo sapiens Rho-related BTB domain ...    30   4.7  
AB020685-1|BAA74901.2|  687|Homo sapiens KIAA0878 protein protein.     30   4.7  

>BC041337-1|AAH41337.1|  611|Homo sapiens Rho-related BTB domain
           containing 3 protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
 Frame = +2

Query: 68  IC*HIPAEVHEKNSTSNVAIQFELTR--QLLER*LASRFIECLTLLVTKKHRSKRCMKSF 241
           +C  I AE+++ +   ++   F +T+   +  R LAS  ++ + LL   K     C+ ++
Sbjct: 492 MCLLICAEMYQVSRLQHICELFIITQLQSMPSRELASMNLDIVDLLKKAKFHHSDCLSTW 551

Query: 242 IIH--GFNYLVYTKQ 280
           ++H    NYL+++++
Sbjct: 552 LLHFIATNYLIFSQK 566


>AB020685-1|BAA74901.2|  687|Homo sapiens KIAA0878 protein protein.
          Length = 687

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
 Frame = +2

Query: 68  IC*HIPAEVHEKNSTSNVAIQFELTR--QLLER*LASRFIECLTLLVTKKHRSKRCMKSF 241
           +C  I AE+++ +   ++   F +T+   +  R LAS  ++ + LL   K     C+ ++
Sbjct: 568 MCLLICAEMYQVSRLQHICELFIITQLQSMPSRELASMNLDIVDLLKKAKFHHSDCLSTW 627

Query: 242 IIH--GFNYLVYTKQ 280
           ++H    NYL+++++
Sbjct: 628 LLHFIATNYLIFSQK 642


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,026,560
Number of Sequences: 237096
Number of extensions: 1103721
Number of successful extensions: 1171
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)