Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0424
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    26   0.21 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
          protein.
          Length = 496

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 84 KICCFWGYWGRFRY 43
          K+ C+WG W  +R+
Sbjct: 25 KVVCYWGTWSTYRW 38


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 82  FYMYFYLIKYIKTNNN*DLPLIYMLVQTL 168
           FY YF+ + YI T  +  L  I+  +  +
Sbjct: 84  FYSYFFYLSYIYTTYSRKLSGIFKYIDQM 112


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 82  FYMYFYLIKYIKTNNN*DLPLIYMLVQTL 168
           FY YF+ + YI T  +  L  I+  +  +
Sbjct: 40  FYSYFFYLSYIYTTYSRKLSGIFKYIDQM 68


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -1

Query: 84  KICCFWGYWGRFRYK 40
           K+ C++  W ++R K
Sbjct: 88  KVVCYYTNWSQYRVK 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,218
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)