Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0423
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 38 0.005
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 38 0.005
04_03_0648 - 18393142-18393174,18393259-18393341,18393569-183936... 37 0.009
08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426 32 0.19
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 32 0.24
04_03_0828 - 20118303-20119086,20119197-20119240 30 0.75
03_02_0695 + 10472174-10472286,10472390-10473239 30 0.99
03_02_0501 - 8920458-8920646,8920918-8921024,8921136-8921352,892... 30 0.99
10_08_0246 + 16149767-16150552 29 1.3
04_03_0745 + 19244089-19244521,19244638-19244723,19245090-192452... 29 1.3
04_01_0406 - 5345149-5345935,5346302-5346339 29 1.3
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 29 1.3
04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820 29 2.3
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 28 3.0
03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 28 3.0
08_02_0546 - 18474217-18475133,18475207-18475396,18475870-184763... 28 4.0
07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550 28 4.0
07_03_1587 + 27937243-27937251,27937813-27937872,27938007-279380... 28 4.0
04_01_0407 - 5350916-5351699,5351930-5351970 28 4.0
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698... 27 5.3
05_06_0266 + 26779191-26779227,26781089-26781218,26781344-26782013 27 5.3
03_06_0604 - 35006004-35008580 27 5.3
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 27 5.3
09_02_0354 - 7720139-7720160,7720516-7720620,7722117-7722481 27 7.0
07_03_1768 - 29363893-29364010,29364568-29365541 27 7.0
03_02_0511 + 9016215-9016425,9017292-9017365,9018399-9018609,901... 27 7.0
01_03_0014 + 11655216-11655287,11657833-11658048,11659848-116619... 27 7.0
01_01_0707 - 5453933-5454619 27 7.0
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 27 7.0
12_02_1230 - 27204881-27205765 27 9.2
05_07_0210 + 28427167-28427589 27 9.2
03_02_0499 - 8908323-8908423,8908822-8908972,8909761-8909867,890... 27 9.2
01_01_0084 - 636835-637965 27 9.2
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 254 AIDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKG 376
AID +G +D+L+NNAGI RD +M + V+L G
Sbjct: 81 AIDTWGTLDVLVNNAGITRDALLMRMKRTQWQEVVDVNLTG 121
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKG 376
K A+D +G ID+L+NNAGI RD +M + ++L G
Sbjct: 139 KAAVDTWGTIDVLVNNAGITRDTLLLRMKKSQWQDVVDLNLTG 181
>04_03_0648 -
18393142-18393174,18393259-18393341,18393569-18393662,
18393746-18393880,18394190-18394222,18394302-18394396,
18394494-18394539,18394639-18394719,18395464-18395517,
18395809-18395951,18397645-18397804
Length = 318
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKG 376
K A+D +G ID+L+NNAGI RD +M + ++L G
Sbjct: 145 KAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTG 187
>08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426
Length = 284
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 242 ANKNAIDNFGRIDILINNAGI 304
A ++A D FGRID+LINNAG+
Sbjct: 94 AVQSAWDAFGRIDVLINNAGL 114
>04_04_0605 +
26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 260 DNFGRIDILINNAGI 304
D FGR+DILINNAGI
Sbjct: 754 DQFGRLDILINNAGI 768
Score = 26.6 bits (56), Expect = 9.2
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Frame = +3
Query: 27 GRVAVVTXXXXXXXXXXXXXXXSRGAKVVVNDLGSAR-----DGAGKSNAADAVV----K 179
GR+A+VT SRG +VV+ AR DG +S AAD+ V
Sbjct: 678 GRIALVTGGNKGVGLETCRQLASRGLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQL 737
Query: 180 EIKDKGGVA-VADY 218
++ D VA +AD+
Sbjct: 738 DVTDAASVARLADF 751
>04_03_0828 - 20118303-20119086,20119197-20119240
Length = 275
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAGI--LRDKSXTKMTXXDXDLIQXVHLKG 376
+A+ +G++D++ NNAGI S + T D D + V+L G
Sbjct: 86 HAVARYGKLDVMFNNAGIGGAACHSILESTKADFDRVLAVNLTG 129
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 29.9 bits (64), Expect = 0.99
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 242 ANKNAIDNFGRIDILINNAGIL 307
A + A+ +GR+D+L NNAG+L
Sbjct: 105 AVERAVARYGRLDVLCNNAGVL 126
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 18 RFDGRVAVVTXXXXXXXXXXXXXXXSRGAKVVVNDLGSARDGAGKSNAA 164
R +G+VA+VT GAKVV+ D+ D AG++ AA
Sbjct: 38 RLEGKVAIVTGGARGIGEAIVRLFVKHGAKVVIADID---DAAGEALAA 83
>03_02_0501 -
8920458-8920646,8920918-8921024,8921136-8921352,
8921744-8922157
Length = 308
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 269 GRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKGA 379
G++DIL+NN G K T+ + D I +L+ A
Sbjct: 133 GKLDILVNNVGTNFSKQTTEYSADDYSFIMATNLESA 169
>10_08_0246 + 16149767-16150552
Length = 261
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +3
Query: 3 ARDQLRFDGRVAVVTXXXXXXXXXXXXXXXSRGAKVVVNDLGSARDGAGKSNAADAVVKE 182
A L DGRVA+VT S GA+VVVN A S ADA +
Sbjct: 5 AASALPLDGRVALVTGGSRGIGREVCAHLASLGARVVVN-------YASNSANADAFAAD 57
Query: 183 IKDKGGVAV 209
+ +G A+
Sbjct: 58 LNSRGAAAL 66
>04_03_0745 +
19244089-19244521,19244638-19244723,19245090-19245221,
19245335-19245499,19245602-19245892
Length = 368
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 224 CRRGGEANKNAIDNFGRIDILINNAGI 304
CRR +A +++FGR+D L+NNAG+
Sbjct: 131 CRRFVQAT---VEHFGRLDHLVNNAGL 154
>04_01_0406 - 5345149-5345935,5346302-5346339
Length = 274
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAGILRDK--SXTKMTXXDXDLIQXVHLKG 376
+A+ FG++D++ NNAG+ T+ T D + + V+L G
Sbjct: 84 HAVATFGKLDVMFNNAGVTGPPCFRITESTKEDFERVLAVNLIG 127
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2
Query: 266 FGRIDILINNAGIL 307
FG++DIL+NNAGIL
Sbjct: 89 FGKLDILVNNAGIL 102
>04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820
Length = 234
Score = 28.7 bits (61), Expect = 2.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAGI 304
+A+ GR+D+L+NNAG+
Sbjct: 29 DAVRELGRVDVLVNNAGV 46
>07_03_1591 + 27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 3 ARDQLRFDGRVAVVTXXXXXXXXXXXXXXXSRGAKVVVNDLGSARDGAGKSNAAD 167
A D R G+VAV+T GAKV++ D+ +D G S AA+
Sbjct: 1065 ASDSQRLAGKVAVITGGASGIGKGTATEFIKNGAKVIIADI---QDDLGHSVAAE 1116
>03_06_0569 +
34789286-34790052,34791216-34791512,34791604-34791835,
34792334-34792391,34792800-34792931,34793108-34793246,
34793460-34793622,34793693-34793734
Length = 609
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 AIDNFGRIDILINNAGILRDKS-XTKMTXXDXDLIQXVHLKGA 379
A+ GR+D++++NAG+L M D + V+ +GA
Sbjct: 72 AVAEHGRLDVMVSNAGVLLPTGPVVDMDLAALDRVMSVNFRGA 114
>08_02_0546 -
18474217-18475133,18475207-18475396,18475870-18476313,
18476629-18477495,18478858-18479367
Length = 975
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = -2
Query: 211 ATATPPLSLISLTTASAA-LDFPAPSLA--LPRSLTTTLA 101
AT PL+ I+ + ASAA PAPSL+ + RSL +T A
Sbjct: 70 ATGAKPLTYITQSAASAASAAAPAPSLSSSIHRSLASTAA 109
>07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550
Length = 298
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 254 AIDNFGRIDILINNAGILRDKSXTKMTXXD 343
A+ GR+D++ NNAGI D + T + D
Sbjct: 102 AVARHGRLDVVFNNAGIPGDLTPTPVGALD 131
>07_03_1587 +
27937243-27937251,27937813-27937872,27938007-27938008,
27938208-27939012
Length = 291
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 254 AIDNFGRIDILINNAGILRDKSXT---KMTXXDXDLIQXVHLKG 376
A+ G++D+++NNAGI+ S + D D + V+ +G
Sbjct: 96 AVARHGQLDVMVNNAGIVGSLSRPPLGALDLADFDAVMAVNTRG 139
>04_01_0407 - 5350916-5351699,5351930-5351970
Length = 274
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAGILRDK--SXTKMTXXDXDLIQXVHLKG 376
+A+ FG++D++ NNAG+ ++ T D + + V+L G
Sbjct: 85 HAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVG 128
>07_03_1727 +
29068348-29068571,29069473-29069514,29069593-29069839,
29069936-29070013,29070551-29070736,29070829-29071126,
29071775-29072244
Length = 514
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2
Query: 266 FGRIDILINNAGI 304
FG++DIL+NNAG+
Sbjct: 165 FGKLDILVNNAGV 177
>05_06_0266 + 26779191-26779227,26781089-26781218,26781344-26782013
Length = 278
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 114 VNDLGSARDGAGKSNAADAVVKEIKDKGGVAVADYNSVVE 233
V D G+ D G +N A A+ D G VADY+SV++
Sbjct: 147 VTDFGAGFD-LGAANMAAALYGSHPDDGAGFVADYSSVLD 185
>03_06_0604 - 35006004-35008580
Length = 858
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 295 IVDKNINPPKIINXVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPS 137
I+D PP + F+S + +TT + + S++S T+SAA P PS
Sbjct: 770 IMDLERPPPPKSSDSFLSLTSATTAT-GVSGSGSTSMVSTFTSSAAPPAPTPS 821
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 238 SPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALP 125
SPST+ + +A PP S +T+S+ + P PSL LP
Sbjct: 42 SPSTS-VGAAPQPPPHSQNISSTSSSNISLPTPSLDLP 78
>09_02_0354 - 7720139-7720160,7720516-7720620,7722117-7722481
Length = 163
Score = 27.1 bits (57), Expect = 7.0
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 268 WED*YSYQQCWH 303
W+D Y Y++CWH
Sbjct: 149 WQDAYFYRRCWH 160
>07_03_1768 - 29363893-29364010,29364568-29365541
Length = 363
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 257 IDNFGRIDILINNAGIL 307
++ GR+D+L NNAG+L
Sbjct: 143 LEQHGRLDVLCNNAGVL 159
>03_02_0511 +
9016215-9016425,9017292-9017365,9018399-9018609,
9019235-9019263,9019646-9020798,9021022-9021251
Length = 635
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 310 TENASIVDKNINPPKIINXVFISFSPSTTEL*SATATPPLSLISLTTASA 161
T N V N P++++ FS TTE +A TPP L TT S+
Sbjct: 253 TSNMFAVGPYANEPQLVSPPV--FSTYTTEPSTAPLTPPPELTHATTPSS 300
>01_03_0014 +
11655216-11655287,11657833-11658048,11659848-11661912,
11662966-11663013,11663081-11663328,11663429-11663558,
11663707-11663983,11664102-11664180,11664311-11664397,
11664586-11664618
Length = 1084
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 221 LCRRGGEANKNAIDNFGRIDILINNAGILRDKS 319
LC G + KN I + G +D GIL KS
Sbjct: 302 LCANGAQHTKNIIGSIGYVDPAFCENGILTPKS 334
>01_01_0707 - 5453933-5454619
Length = 228
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 193 LSLISLTTASAALDFPAPSLALPRSLTTTLAPRD 92
++ +S+ A A L+FP + ALPR +LAPRD
Sbjct: 87 VAALSIKGARAVLNFPDLAPALPR--PASLAPRD 118
>01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 310 TENASIVDKNINPPKIINXVFISFSPSTTEL*SATATPPLSLISLTTASA 161
T N V N P++++ FS TTE +A TPP L TT S+
Sbjct: 1029 TSNMFAVGPYANEPQLVSPPV--FSTYTTEPSTAPLTPPPELAHATTPSS 1076
>12_02_1230 - 27204881-27205765
Length = 294
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +2
Query: 269 GRIDILINNAGI 304
GR+D+L+NNAGI
Sbjct: 87 GRVDVLVNNAGI 98
>05_07_0210 + 28427167-28427589
Length = 140
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 181 SLTTASAALDFPAPSLALPRSLTTTLAPR 95
S+T A+AA P P+ A P ++ LAPR
Sbjct: 104 SITAAAAAESAPPPASASPDAVLPFLAPR 132
>03_02_0499 -
8908323-8908423,8908822-8908972,8909761-8909867,
8909954-8910170,8910941-8911148,8911261-8911358
Length = 293
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 260 DNFG-RIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKGA 379
D FG ++DIL+NN G K T+ + + + +L+ A
Sbjct: 93 DRFGGKLDILVNNVGTNIRKPTTEYSADEYSFLMATNLESA 133
>01_01_0084 - 636835-637965
Length = 376
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 250 FISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSL 116
F+S S S+T + S L LTT S +L PAPS LP+++
Sbjct: 64 FLSTSLSSTSV-SLPRFRSLLASFLTTLSNSLSLPAPSPNLPQAI 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,033,825
Number of Sequences: 37544
Number of extensions: 140696
Number of successful extensions: 505
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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