Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0423
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 72 2e-13
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 33 0.096
Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical p... 31 0.29
Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical p... 31 0.29
Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical pr... 31 0.39
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 31 0.39
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 31 0.39
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 31 0.51
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 31 0.51
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 31 0.51
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 30 0.89
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 30 0.89
AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenase... 30 0.89
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 29 1.6
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 28 2.7
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 28 2.7
AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical ... 28 2.7
Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81581-10|CAN86611.1| 309|Caenorhabditis elegans Hypothetical p... 27 4.8
Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81035-3|CAB02732.1| 333|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical ... 27 4.8
AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical ... 27 4.8
Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical p... 27 6.3
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical ... 27 6.3
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 71.7 bits (168), Expect = 2e-13
Identities = 53/146 (36%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Frame = +3
Query: 15 LRFDGRVAVVTXXXXXXXXXXXXXXXSRGAKVVVNDLGSARDGAGKSNA-ADAVVKEIKD 191
LRFDG+VA+VT RG KVVVNDLG R G S++ AD VV+EIK
Sbjct: 3 LRFDGKVAIVTGAGGGLGKTYALELAKRGCKVVVNDLGGDRHGTSSSSSMADKVVQEIKS 62
Query: 192 KGGVAVADYNSVVEGEXXXXXXXXXXXXXXFLSTMLAFSVIRAXLK*LXXTXT*FSXSI* 371
GG AVA+Y+SV G+ + + LK
Sbjct: 63 AGGQAVANYDSVEFGDKIVKTAIDNFGRIDIVINNAGILRDVSFLKMTELDWDLIFKVHV 122
Query: 372 KVLFKTTYAAWXTFILLKYGRIVMTS 449
K + T AAW KYGRIV+TS
Sbjct: 123 KGAYAVTKAAWPYMRDQKYGRIVVTS 148
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = +2
Query: 233 GGEANKNAIDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKGA 379
G + K AIDNFGRIDI+INNAGILRD S KMT D DLI VH+KGA
Sbjct: 77 GDKIVKTAIDNFGRIDIVINNAGILRDVSFLKMTELDWDLIFKVHVKGA 125
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 33.1 bits (72), Expect = 0.096
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E ++A+D FGRID+L+NNAG
Sbjct: 75 EIVQSALDAFGRIDVLVNNAG 95
>Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical
protein F28H7.2 protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAG 301
K+ +D FG+IDIL+NNAG
Sbjct: 78 KSTLDKFGKIDILVNNAG 95
>Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.29
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 257 IDNFGRIDILINNAGIL 307
I NFG++DILINNAG L
Sbjct: 83 IHNFGKLDILINNAGTL 99
>Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.29
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 257 IDNFGRIDILINNAGIL 307
I NFG++DILINNAG L
Sbjct: 83 IHNFGKLDILINNAGTL 99
>Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical
protein T05F1.10 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 215 LQLCRRG--GEANKNAIDNFGRIDILINNAGILRDK 316
+ LC G + + I++ G++DIL+NNAGI K
Sbjct: 96 VNLCDPGKIAQVGQQVINDIGKVDILVNNAGIATAK 131
>Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical
protein C01G12.5 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.39
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E + +D FGR+DIL+NNAG
Sbjct: 75 ELMNSTVDIFGRLDILVNNAG 95
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 257 IDNFGRIDILINNAGILR 310
+ FGRID LIN+AGILR
Sbjct: 76 VQKFGRIDTLINSAGILR 93
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E K+ + FG+IDILINNAG
Sbjct: 75 ELIKSTLSRFGKIDILINNAG 95
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 221 LCRRGG--EANKNAIDNFGRIDILINNAGIL 307
+C G E + + FG+IDIL+NNAG L
Sbjct: 67 VCEASGQDEVIRTTLAKFGKIDILVNNAGAL 97
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 30.7 bits (66), Expect = 0.51
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAG 301
++A+ FG+IDILINNAG
Sbjct: 78 QSAVKKFGKIDILINNAG 95
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 30.7 bits (66), Expect = 0.51
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 257 IDNFGRIDILINNAGILR 310
+ FGRID LIN+AGILR
Sbjct: 77 VQKFGRIDSLINSAGILR 94
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.89
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAGI--LRDKSXTKMTXXDXDLIQXVHLKG 376
+ A+ FG IDILINNA L D T+M DL+ ++ +G
Sbjct: 85 EEAVKKFGGIDILINNASAISLTDTENTEMKR--YDLMHSINTRG 127
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.89
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E + I FGR+DIL+NNAG
Sbjct: 76 ELVNSTIQKFGRLDILVNNAG 96
>AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenases,
short chain protein14 protein.
Length = 279
Score = 29.9 bits (64), Expect = 0.89
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E + I FGR+DIL+NNAG
Sbjct: 75 ELVNSTIQKFGRLDILVNNAG 95
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 257 IDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKG 376
+ + G IL+N AGI +D + KM D + V+L G
Sbjct: 77 VKSLGTPSILVNCAGITKDSTLLKMKQEQWDSVIKVNLTG 116
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAG 301
+ +D FG+I+ILINNAG
Sbjct: 79 STLDKFGKINILINNAG 95
>Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical
protein C45B11.3 protein.
Length = 293
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 AIDNFGRIDILINNAGILRDKSXTKMTXXDXDLIQXVHLKG 376
A+ FG IDILINNA + + DL+ ++ +G
Sbjct: 91 AVKKFGGIDILINNASAISLTNTEDTDMKRYDLMHSINTRG 131
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 244 SFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLAP 98
S+SP L +TP LS TA +A+ AP+L +P + P
Sbjct: 44 SYSPFYQALFGGASTPVLSAPVAKTAPSAIPLAAPALPVPIAAAPFFTP 92
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -2
Query: 277 NPPKIINXVFISFSPSTTE-L*SATA--TPPLSLISLTTASAALDFPAPSLA 131
+PP S+ PS + SAT+ TPP S ++ A L+FP PSL+
Sbjct: 415 SPPSYPTQQQSSYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNFPMPSLS 466
>AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical
protein F12E12.11 protein.
Length = 402
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 257 IDNFGRIDILINNAG 301
+ FGR+DIL+NNAG
Sbjct: 203 LQKFGRLDILVNNAG 217
>Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical
protein D1054.8 protein.
Length = 278
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAGILRDKSXTK 328
E + FG++DIL+NNAG S +K
Sbjct: 75 EILSTTLGKFGKLDILVNNAGAAIPDSQSK 104
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 244 SFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALP 125
S+SP L +TP LS TA +A+ AP+L +P
Sbjct: 57 SYSPFYQALFGGASTPVLSAPVAKTAPSAIPLAAPALPVP 96
>Z81581-10|CAN86611.1| 309|Caenorhabditis elegans Hypothetical
protein T02E1.5b protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 269 GRIDILINNAGILRDK 316
G++DIL+NNAGI+ K
Sbjct: 117 GKVDILVNNAGIVTGK 132
>Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical
protein T02E1.5a protein.
Length = 307
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 269 GRIDILINNAGILRDK 316
G++DIL+NNAGI+ K
Sbjct: 115 GKVDILVNNAGIVTGK 130
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/57 (22%), Positives = 32/57 (56%)
Frame = -2
Query: 271 PKIINXVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLA 101
P+ + +I F+PS+ + S+ +T P ++ + +++ L P P + + R + T++
Sbjct: 406 PEAPDFHYIYFNPSSLSMTSSLSTSPKLPVAASGSNSTLKVPLPPVDVNRLVCDTMS 462
>Z81035-3|CAB02732.1| 333|Caenorhabditis elegans Hypothetical
protein C15H11.4 protein.
Length = 333
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 242 ANKNAIDNFGRIDILINNAGIL 307
A K +++ IDILINNAGI+
Sbjct: 116 AAKETLESTDTIDILINNAGIM 137
>AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical
protein W03F9.9 protein.
Length = 280
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAGIL 307
+ + FG+I+ILINNAG L
Sbjct: 80 STLKKFGKINILINNAGAL 98
>AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical
protein R05D8.7 protein.
Length = 280
Score = 27.5 bits (58), Expect = 4.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 251 NAIDNFGRIDILINNAG 301
+ + FG+ID+L+NNAG
Sbjct: 79 STLKQFGKIDVLVNNAG 95
>Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical
protein T11F9.11 protein.
Length = 307
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 248 KNAIDNFGRIDILINNAGILRDK 316
K + G IDILINNAGI+ K
Sbjct: 108 KETKEAVGDIDILINNAGIVTGK 130
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 266 FGRIDILINNAG 301
FG+IDIL+NNAG
Sbjct: 84 FGKIDILVNNAG 95
>Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical
protein F02C12.2 protein.
Length = 278
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 239 EANKNAIDNFGRIDILINNAG 301
E + FGRI+IL+NNAG
Sbjct: 76 ELISQTLKKFGRINILVNNAG 96
>AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical
protein K06H6.4 protein.
Length = 467
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 244 SFSPSTTEL*SATATPPLSLISLTT 170
++ PSTT+L A PP SL + TT
Sbjct: 75 NWKPSTTDLTKVAALPPESLFNTTT 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,526,634
Number of Sequences: 27780
Number of extensions: 116347
Number of successful extensions: 458
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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