Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0418
(464 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 31 0.005
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 4.3
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 4.3
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 21 4.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 5.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 9.8
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 20 9.8
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 20 9.8
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 20 9.8
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 31.1 bits (67), Expect = 0.005
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 16 RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 144
R I L +D + ++ TV S +K R C+C YKCGD
Sbjct: 92 RTITLTHCYDPDGVRLTAETVNSMDVKLREPAECKC--YKCGD 132
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 1.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 426 SACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNP 316
S + + + +PG P RV T+ + S +VY P
Sbjct: 983 SETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 356 VFTRHPGHGWP 388
V++RHP WP
Sbjct: 156 VYSRHPYESWP 166
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.4 bits (43), Expect = 4.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 199 IYKIFFHTMSRH*KTTPQNHHTCITHI 119
IY IFF +H K C+T++
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYV 203
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 21.4 bits (43), Expect = 4.3
Identities = 17/80 (21%), Positives = 29/80 (36%)
Frame = +3
Query: 186 NILYISQDDRVQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLL 365
N+ I+QD + G + I I + F YD + +Y V G T +
Sbjct: 14 NLASIAQDPSASVDAATGGGSVLGDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYV 73
Query: 366 DILDTAGQEEYSAMRDQYMR 425
+ + + + D Y R
Sbjct: 74 LSISSLSEVKMDFTLDFYFR 93
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 5.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 441 RILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNPLS 310
R LP S C S ++L CP S R+ L+ G LS
Sbjct: 77 RDLPNSRCNSRESSDSLVQPRCPSGESMLS-ERAALLRGVPTLS 119
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D + EGF
Sbjct: 584 CTL-LLQRGYRVEYSAASDAFTHCPEGF 610
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D + EGF
Sbjct: 817 CTL-LLQRGYRVEYSAASDAFTHCPEGF 843
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 357 CLLDILDTAGQEEYSAMRDQYMRTGEGF 440
C L +L + EYSA D + EGF
Sbjct: 817 CTL-LLQRGYRVEYSAASDAFTHCPEGF 843
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.2 bits (40), Expect = 9.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 262 NADYQRLPHPQPPI 221
N Q PH QPPI
Sbjct: 197 NMHQQGPPHQQPPI 210
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 20.2 bits (40), Expect = 9.8
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 10 VNRLIVLFIAFDSNNTLISRFTVTSS 87
V +V+FI FD ++ + + +T++
Sbjct: 374 VTTYLVIFIQFDQSSNSRNNYVLTNN 399
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 20.2 bits (40), Expect = 9.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 324 TNPLSWDRI 298
+NP+ WDR+
Sbjct: 261 SNPIMWDRV 269
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.2 bits (40), Expect = 9.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 262 NADYQRLPHPQPPI 221
N Q PH QPPI
Sbjct: 199 NMHQQGPPHQQPPI 212
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,801
Number of Sequences: 336
Number of extensions: 2471
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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