BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0418
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 56 1e-08
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 56 1e-08
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 56 1e-08
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 54 7e-08
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 52 3e-07
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 50 7e-07
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 50 7e-07
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 48 3e-06
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 48 5e-06
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 47 7e-06
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 46 2e-05
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 46 2e-05
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 45 3e-05
05_03_0286 - 11623575-11624063,11625098-11625262 45 3e-05
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 44 5e-05
01_06_1343 - 36461476-36461961,36463355-36463519 44 5e-05
01_06_0712 + 31397167-31397402,31399823-31400252 44 5e-05
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 44 8e-05
11_03_0182 + 11307275-11307368,11307485-11307594,11307654-113078... 43 1e-04
06_03_0414 - 20548577-20549006,20553521-20553744 43 1e-04
05_06_0082 - 25425050-25425479,25426551-25426783 43 1e-04
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 43 1e-04
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 43 1e-04
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 42 2e-04
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 42 2e-04
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 42 2e-04
05_01_0036 + 253734-253904,255216-255707 40 7e-04
09_02_0464 - 9591139-9591571,9592601-9592818 40 0.001
05_07_0127 - 27872803-27873238,27873842-27874059 40 0.001
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 39 0.002
05_06_0217 + 26457847-26457902,26458336-26458435,26458551-264586... 39 0.002
06_03_1187 + 28267535-28267568,28267620-28267645,28267808-282679... 39 0.002
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 39 0.002
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 38 0.004
01_06_0186 + 27294973-27295211,27295610-27296045 38 0.005
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 37 0.007
06_03_1387 - 29820358-29821035 37 0.009
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 36 0.016
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 35 0.028
03_06_0637 - 35219212-35219754,35220405-35220587 35 0.028
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 32 0.26
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 31 0.35
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 31 0.46
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 31 0.46
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 31 0.46
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 30 0.80
09_06_0029 + 20336634-20336881,20337737-20338208 29 1.4
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 29 1.4
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 29 1.8
06_01_0803 + 6030742-6031038,6031228-6031314,6031620-6031821,603... 27 7.4
10_02_0159 + 6020441-6020971 27 9.8
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 27 9.8
03_06_0718 + 35709030-35709587,35709946-35709951 27 9.8
03_05_0307 - 22958963-22959176,22959295-22959557,22959565-22959828 27 9.8
02_05_0700 + 31018480-31019832 27 9.8
01_06_0208 - 27540077-27540992,27541310-27541497 27 9.8
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ VV+DG T L + DTAGQE+Y+ +R R +
Sbjct: 20 TCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGAD 79
Query: 435 GFLLVFAVNS 464
FLL F++ S
Sbjct: 80 VFLLAFSLIS 89
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ VV+DG T L + DTAGQE+Y+ +R R +
Sbjct: 20 TCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGAD 79
Query: 435 GFLLVFAVNS 464
FLL F++ S
Sbjct: 80 VFLLAFSLIS 89
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ VV+DG T L + DTAGQE+Y+ +R R +
Sbjct: 20 TCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGAD 79
Query: 435 GFLLVFAVNS 464
FLL F++ S
Sbjct: 80 VFLLAFSLIS 89
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 53.6 bits (123), Expect = 7e-08
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ VV+DG T L + DTAGQE+Y+ +R R +
Sbjct: 22 TCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDTAGQEDYNRLRPLSYRGAD 81
Query: 435 GFLLVFAV 458
F+L F++
Sbjct: 82 VFVLAFSL 89
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ VV+D T L + DTAGQE+Y+ +R R +
Sbjct: 22 TCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDTAGQEDYNRLRPLSYRGAD 81
Query: 435 GFLLVFAVNS 464
F+L F++ S
Sbjct: 82 VFVLAFSLVS 91
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 50.4 bits (115), Expect = 7e-07
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ + I N F +Y PT+ D++ V +DG L + DTAGQE+YS +R R +
Sbjct: 21 TCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGAD 80
Query: 435 GFLLVFAVNS 464
F+L F++ S
Sbjct: 81 IFVLAFSLIS 90
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 234 GCGRRW*SALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMR 410
G GR ++L ++ + + F D+ + T++ SY K++V++G L I DTAGQE++ A+
Sbjct: 21 GDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEKFHALG 80
Query: 411 DQYMRTGEGFLLVFAV 458
Y R + LLV+ +
Sbjct: 81 PIYYRDADAALLVYDI 96
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 186 NILYISQDDRVQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCL 362
N+L+ + IG G G+ S L ++ + ++D Y TI ++ + V DG+T
Sbjct: 18 NVLFDYLFKLLLIGDSGVGK---SCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIK 74
Query: 363 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
L I DTAGQE + + Y R G ++V+ V
Sbjct: 75 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 106
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ + ++D Y TI ++ + V DG+T L I DTAGQE +
Sbjct: 14 IGDSGVGK---SCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 70
Query: 399 SAMRDQYMRTGEGFLLVFAV 458
+ Y R G ++V+ V
Sbjct: 71 RTITSSYYRGAHGIIIVYDV 90
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 297 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
+Y PT+ D++ V +DG L + DTAGQE+YS +R R + F+L F++ S
Sbjct: 67 DYIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLIS 122
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V +G G G+ S+L ++ ++ FV+ + TI ++ Q + ++ ET +I DTAGQE
Sbjct: 15 VLLGDVGAGK---SSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQE 71
Query: 393 EYSAMRDQYMRTGEGFLLVFAVNS 464
Y ++ Y R ++V+ + +
Sbjct: 72 RYHSLAPMYYRGAAAAIVVYDITN 95
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ + +++ Y TI ++ + V DG+T L I DTAGQE +
Sbjct: 14 IGDSGVGK---SCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 70
Query: 399 SAMRDQYMRTGEGFLLVFAV 458
+ Y R G ++V+ V
Sbjct: 71 RTITSSYYRGAHGIIVVYDV 90
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V +G G G+ S+L ++ ++ FV+ + TI ++ Q + ++ ET +I DTAGQE
Sbjct: 15 VLLGDVGTGK---SSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQE 71
Query: 393 EYSAMRDQYMRTGEGFLLVFAVNS 464
Y ++ Y R ++V+ + +
Sbjct: 72 RYHSLAPMYYRGAAAAIVVYDITN 95
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 44.8 bits (101), Expect = 3e-05
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S + + +NHF + TI + K + ++G+T I DTAGQE
Sbjct: 16 VLIGDSGVGK---SNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQE 72
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G LLV+ +
Sbjct: 73 RYRAITSAYYRGAVGALLVYDI 94
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 SALTIQLIQ-NHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 428
S+L + + +H DE PTI ++ K + ++G+ L I DTAGQE + + Y R
Sbjct: 26 SSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQERFRGITSSYYRG 85
Query: 429 GEGFLLVFAV 458
G +LV+ V
Sbjct: 86 AHGIILVYDV 95
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V IG G G+ S + + +N F E TI + + + I+G+T I DTAGQE
Sbjct: 16 VLIGDSGVGK---SNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQE 72
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G LLVF +
Sbjct: 73 RYRAITSAYYRGAVGALLVFDI 94
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + +DG+ I DTAGQE
Sbjct: 22 VLIGDSGVGK---SNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQE 78
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G LLV+ V
Sbjct: 79 RYRAITSAYYRGAVGALLVYDV 100
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L +Q F +D TI + + + ID + L I DTAGQE +
Sbjct: 12 IGDTGVGK---SCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESF 68
Query: 399 SAMRDQYMRTGEGFLLVFAV 458
++ Y R G LLV+ +
Sbjct: 69 RSITRSYYRGAAGALLVYDI 88
>11_03_0182 +
11307275-11307368,11307485-11307594,11307654-11307856,
11307879-11307964,11308861-11308934,11308936-11309078,
11309485-11309594,11309645-11309787
Length = 320
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 297 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
+Y PT+ D++ V +DG L + TAGQE+YS +R R + F+L F++ S
Sbjct: 3 DYIPTVFDNFSANVSVDGNIINLGLWGTAGQEDYSRLRILSYRGADIFVLAFSLIS 58
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + +DG+ I DTAGQE
Sbjct: 18 VLIGDSGVGK---SNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQE 74
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G LLV+ V
Sbjct: 75 RYRAITSAYYRGAVGALLVYDV 96
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + +DG+ I DTAGQE
Sbjct: 21 VLIGDSGVGK---SNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQE 77
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G LLV+ V
Sbjct: 78 RYRAITSAYYRGAVGALLVYDV 99
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L +Q F +D TI + + + +D L I DTAGQE +
Sbjct: 12 IGDTGVGK---SCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQESF 68
Query: 399 SAMRDQYMRTGEGFLLVFAV 458
++ Y R G LLV+ +
Sbjct: 69 RSITRSYYRGAAGALLVYDI 88
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEY 398
+G G G+ ++L Q + F ++Y TI D K+V ID L I DTAGQE +
Sbjct: 14 LGDSGVGK---TSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERF 70
Query: 399 SAMRDQYMRTGEGFLLVFAVN 461
++ + R + +LV+ VN
Sbjct: 71 QSLGVAFYRGADCCVLVYDVN 91
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V IG G G+ S L +Q F + D T Y VV +DG+ L I DTAGQE
Sbjct: 12 VTIGDAGVGK---SCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQE 68
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
+ + Y R LLV+ +
Sbjct: 69 AFRCITRSYYRGNAACLLVYDI 90
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 431
S L + +N F TI ++ Q +VIDG+ I DTAGQE + A+ Y R
Sbjct: 28 SNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRAVTSAYYRGA 87
Query: 432 EGFLLVFAVN 461
G LLV+ ++
Sbjct: 88 VGALLVYDIS 97
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 285 HFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
H D+ PTI ++ K + I G+ L I DTAGQE + + Y R +G +LV+ V
Sbjct: 47 HLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDV 105
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 40.3 bits (90), Expect = 7e-04
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + ++G+ I DTAGQE
Sbjct: 18 VLIGDSGVGK---SNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQE 74
Query: 393 EYSAMRDQYMRTGEGFLLVFAVN 461
Y A+ Y R G +LV+ V+
Sbjct: 75 RYRAITSAYYRGALGAVLVYDVS 97
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + +D + I DTAGQE
Sbjct: 16 VLIGDSGVGK---SNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQE 72
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G L+V+ V
Sbjct: 73 RYRAITSAYYRGAVGALVVYDV 94
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + +N F E TI + + + +D + I DTAGQE
Sbjct: 16 VLIGDSGVGK---SNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 72
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G L+V+ V
Sbjct: 73 RYRAITSAYYRGAVGALVVYDV 94
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V IG G+ S L + +N F + TI ++ + + ID T I DTAGQE
Sbjct: 22 VLIGDSAVGK---SQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQE 78
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G +LV+ +
Sbjct: 79 RYRAVTSAYYRGAVGAMLVYDI 100
>05_06_0217 +
26457847-26457902,26458336-26458435,26458551-26458697,
26459040-26459120,26459251-26459396,26459509-26459572
Length = 197
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 276 IQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVF 452
+ F +Y TI D K+V+I+ L I DTAGQE + ++ + R + +LV+
Sbjct: 21 VNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCMLVY 80
Query: 453 AVNS 464
VN+
Sbjct: 81 DVNA 84
>06_03_1187 +
28267535-28267568,28267620-28267645,28267808-28267975,
28268148-28268196,28268329-28268402,28268512-28268841
Length = 226
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 303 DPTIEDSYRKQVVI-DGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
+ TI ++ QV+I D T LDI DTAGQE Y ++ Y R ++V+ ++S
Sbjct: 21 ESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISS 75
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 330 KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
+ + +DG+T L I DTAGQE + + Y R G ++V+ V
Sbjct: 32 RTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 74
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 342 IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
I+G+T I DTAGQE Y A+ Y R G LLV+ +
Sbjct: 87 IEGQTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 125
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L + ++ F E TI + K V +D I DTAGQE
Sbjct: 23 VLIGDSGVGK---SNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQE 79
Query: 393 EYSAMRDQYMRTGEGFLLVFAV 458
Y A+ Y R G L+V+ V
Sbjct: 80 RYRAITSAYYRGAVGALVVYDV 101
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 276 IQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVF 452
+ F ++Y TI D K+V + L I DTAGQE + ++ + R + +LV+
Sbjct: 20 VNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVY 79
Query: 453 AVNS 464
VNS
Sbjct: 80 DVNS 83
>06_03_1387 - 29820358-29821035
Length = 225
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 288 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
F+D + + V I G+ I DTAGQE Y A+ Y R G +LV+ V S
Sbjct: 33 FIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDVTS 91
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 35.9 bits (79), Expect = 0.016
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 431
+++ + + + F + Y TI D K + ++ T L + DTAGQE + ++ Y+R
Sbjct: 23 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS 82
Query: 432 EGFLLVFAVNS 464
++VF V S
Sbjct: 83 SVAVIVFDVAS 93
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 392
V IG G+ S L + +N F TI ++ Q + I+G+ I DTAGQE
Sbjct: 17 VIIGDSAVGK---SNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQE 73
Query: 393 EYSAMRDQYMRTGEGFLLVFAVN 461
+ A+ Y R G LLV+ ++
Sbjct: 74 RFRAVTSAYYRGAFGALLVYDIS 96
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 35.1 bits (77), Expect = 0.028
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 342 IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
++G+ I DTAGQE Y A+ Y R G LLV+ V
Sbjct: 80 VEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDV 118
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ F + TI ++ + V +DG+ L I DTAGQE +
Sbjct: 21 IGDSGVGK---SCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERF 77
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ F + TI ++ + + +DG+ L I DTAGQE +
Sbjct: 21 IGDSGVGK---SCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 77
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVI--DGETCLLDILDTAGQ 389
V +G G G+ S + ++ ++ F T+ S+ Q + D T +I DTAGQ
Sbjct: 48 VLLGDSGVGK---SCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQ 104
Query: 390 EEYSAMRDQYMRTGEGFLL 446
E + +Y R+ E +L+
Sbjct: 105 ESI-CVAIRYQRSHENWLI 122
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 375 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
DTAGQE++ +RD Y G+ +++F V S
Sbjct: 68 DTAGQEKFGGLRDGYYIHGQCAIIMFDVTS 97
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 375 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
DTAGQE++ +RD Y G+ +++F V S
Sbjct: 68 DTAGQEKFGGLRDGYYIHGQCAIIMFDVTS 97
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 375 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 464
DTAGQE++ +RD Y G +++F V S
Sbjct: 496 DTAGQEKFGGLRDGYYIHGHCAIIMFDVTS 525
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 369 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
I DTAGQE Y A+ Y R G ++V+ +
Sbjct: 75 IWDTAGQERYRAVTSAYYRGALGAMVVYDI 104
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 202 RKMTEYKLVVVGAGGVGNPH*LY 270
RK+++ ++VVGAGG+G+P +Y
Sbjct: 92 RKLSQSSILVVGAGGLGSPVAMY 114
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
S L ++ F + TI ++ + + +DG+ L I DTAGQE +
Sbjct: 42 SCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 90
>06_01_0803 +
6030742-6031038,6031228-6031314,6031620-6031821,
6031926-6032047,6032226-6032447
Length = 309
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 447 PARILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRSRL 334
P +L +ACI S +T G P + S +R R+
Sbjct: 270 PIGVLDAAACISQQSEDTFVGSPATNYESSASSKRRRI 307
>10_02_0159 + 6020441-6020971
Length = 176
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 444 ARILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNPLSWD 304
A +L + + +++ T Q P VN H +R G P+SWD
Sbjct: 9 AAVLAVAISLAMAATTTTSAQNTPQDYVNL-HNSARRADGVGPVSWD 54
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 321 SYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVN 461
+Y+ V +DG LDT G E + AMR + R + ++V + +
Sbjct: 466 AYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVSAD 512
>03_06_0718 + 35709030-35709587,35709946-35709951
Length = 187
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 128 NTSVVILGRCFLVP*HCVKKYFVY 199
NTS++ILG P HC + F++
Sbjct: 31 NTSILILGSATRAPTHCTRGVFLW 54
>03_05_0307 - 22958963-22959176,22959295-22959557,22959565-22959828
Length = 246
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 427 VRMYWSLIAEYSSWPAVSRMSSKHVSPSITTCLR 326
+RM SL+A + PA + + ++HV ++ TC+R
Sbjct: 101 MRMLQSLLACLRA-PAATALGNQHVCTAVNTCIR 133
>02_05_0700 + 31018480-31019832
Length = 450
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 450 IPARILPRSACIGLSSPNT-LPGQPCPG 370
+P + LP +G P LPGQP PG
Sbjct: 71 LPGQSLPGQPLVGEKPPGQPLPGQPLPG 98
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 448 TSKNPSPVRMYWSLIAEYSSWPAVSRMS--SKHVSPSITTCLRYESSIVGSYSSTK 287
+++ P + WS +A SS+P ++R S SK SPS+ R+ + S T+
Sbjct: 168 SARPPLGLAAVWSALAAGSSFPWLARRSLCSKSSSPSLWGASRHGEGVGRSTRKTQ 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,909,647
Number of Sequences: 37544
Number of extensions: 300846
Number of successful extensions: 945
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -