Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0418
(464 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 24 0.70
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 24 0.70
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 0.93
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 1.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 1.6
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 4.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 6.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.6
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 24.2 bits (50), Expect = 0.70
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 16 RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 144
R I L +D++ I + V++ + R+P C+ KCGD
Sbjct: 102 RHITLHHCYDADG--IKLMNEENGVMEIKIREPVECKCIKCGD 142
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 24.2 bits (50), Expect = 0.70
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 16 RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 144
R I L +D++ I + V++ + R+P C+ KCGD
Sbjct: 102 RHITLHHCYDADG--IKLMNEENGVMEIKIREPVECKCIKCGD 142
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.8 bits (49), Expect = 0.93
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 347 R*DVFTRHPGHGWPGRVFGDERPI 418
R +V R PG WPG +RPI
Sbjct: 908 RSNVTPRSPGRAWPGDSDIRQRPI 931
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 332 FTVRILYRGIVFVHEVILYQLYSQ 261
+T L G V VH+ + YQLY +
Sbjct: 417 YTPSSLELGEVAVHDPVFYQLYKK 440
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -1
Query: 212 VILRDIQNIFSHNVTALENNAPESPHL 132
+++RD + + E P SPHL
Sbjct: 94 ILIRDFSKFANRGLGVFERTEPLSPHL 120
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 178 CEKIFCISRKMTEYK 222
CEK+ CI RK T +K
Sbjct: 74 CEKVGCICRK-TSFK 87
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 253 YQRLPHPQPPICTRSSCEIYKIFF 182
+Q L +PP +SSCEI +F
Sbjct: 137 HQGLVEWKPPAIYKSSCEIDVEYF 160
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 195 YISQDDRVQIGGCGCGR 245
YIS +D GCG G+
Sbjct: 389 YISWEDTQDPQGCGAGK 405
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 232 QPPICTRSSCEIYKIFF 182
QPP +SSC I FF
Sbjct: 144 QPPAVYKSSCSIDVEFF 160
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 195 YISQDDRVQIGGCGCGR 245
YIS +D GCG G+
Sbjct: 389 YISWEDTQDPQGCGAGK 405
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 209 ILRDIQNIFSHNVTALENNAPESPHLYYS 123
I+ + N + N++ NN + LYY+
Sbjct: 81 IISSLSNNYISNISNYNNNNNYNKKLYYN 109
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 463 LLTANTSKNPSPVRMYWSLIAEYS 392
+L + S NP R+Y L++ Y+
Sbjct: 14 VLISGCSGNPDAKRLYDDLLSNYN 37
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 209 ILRDIQNIFSHNVTALENNAPESPHLYYS 123
I+ + N + N++ NN + LYY+
Sbjct: 319 IISSLSNNYISNISNYNNNNNYNKKLYYN 347
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 232 QPPICTRSSCEIYKIFF 182
+PP +SSCEI +F
Sbjct: 149 KPPAIYKSSCEINVEYF 165
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,668
Number of Sequences: 438
Number of extensions: 3302
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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