Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0417
         (443 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   8.5  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    22   8.5  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    22   8.5  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 302  YTPVDXLVVLVLCNERILKYSLCS 231
            YTP    V   LCN  +LK +L S
Sbjct: 1483 YTPDTAEVRATLCNNGLLKQNLYS 1506


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 215 HTLXQYYIKNISISFHCIKLERQ 283
           H L ++Y+ +I   FH + L+ +
Sbjct: 120 HELREFYVDSIQECFHMLGLDNR 142


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 115 RSSSARVYKSSRGR*LFWCIM-LSERFLATMNRFI 14
           R+  +  + S + + +F  I  + + FLAT+NRF+
Sbjct: 133 RNKLSPTFTSGKIKLMFSTICEIGDEFLATVNRFV 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,246
Number of Sequences: 2352
Number of extensions: 6968
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)