Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0412
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   7.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           22   7.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    22   7.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 122 MSSGGTRVYVGGLVEGIKKE--DLERE 196
           +  GG  V   G+VEG  K+  D+ERE
Sbjct: 798 LEGGGKMVLQEGVVEGGTKDETDMERE 824


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 273 VLKFYETKPGGFSATQTE 220
           VLK +E KP G S   TE
Sbjct: 673 VLKVHELKPNGASIAVTE 690


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 114 TKP*VRVVLACTSAVSSRESRRKISNASSIN 206
           TK   R + ACT  VSS   R++++ +S++N
Sbjct: 33  TKSMCREMRACTVMVSS--DRKRLTASSAVN 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,162
Number of Sequences: 2352
Number of extensions: 6519
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)