Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0409
         (483 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QLS0 Cluster: Chromosome chr18 scaffold_121, whole ge...    32   7.8  
UniRef50_Q7RRF9 Cluster: Protein kinase domain, putative; n=6; P...    32   7.8  

>UniRef50_A7QLS0 Cluster: Chromosome chr18 scaffold_121, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_121, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 298

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 185 LLHPRPVLPQ*KQHLFLEVVHLCVAVHDL 99
           L+ PRP+ PQ  QHL L V+H C+ +  L
Sbjct: 180 LVTPRPLRPQAHQHLVLLVLHPCLVLQTL 208


>UniRef50_Q7RRF9 Cluster: Protein kinase domain, putative; n=6;
           Plasmodium (Vinckeia)|Rep: Protein kinase domain,
           putative - Plasmodium yoelii yoelii
          Length = 1018

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 257 SMCTVKINFCFSLMVSKLKYLVNSHVSSNLLNYRDS 364
           S CT   N+C+SL   K+   +N  ++  + NY +S
Sbjct: 192 SFCTPYYNYCYSLPNQKINQKINQKINQKINNYSNS 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,156,803
Number of Sequences: 1657284
Number of extensions: 5377947
Number of successful extensions: 13009
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13007
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)